1 5' 3' | 2 5' 3' | 3 5' 3' |
gttactctctctcactctcgatctgtctatctgtatcgctttgttgctcttaaagagagaatctaatttcgaaatgttgtgtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTGGAGGTGGAAAACAGAAGAAGAAG
species | Arabidopsis thaliana |
transcript | AT2G21580.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036228|gb|DR331981.1|DR331981
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036226|gb|DR331979.1|DR331979
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036287|gb|DR332040.1|DR332040
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|125132601|gb|EL174589.1|EL174589
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: CTGCTCGCCGATCGTTACTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGEST: gi|86079503|gb|DR375260.1|DR375260
genomic: CTGCTCGCCGATCGTTACTCCGTCGAAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAG
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036273|gb|DR332026.1|DR332026
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036221|gb|DR331974.1|DR331974
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|116414979|gb|EG457571.1|EG457571
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: CTTTCGTCTCTTCTCTGCTCGCCGATCGTTACTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036231|gb|DR331984.1|DR331984
genomic: CTTTCGTCTCTTCTCTGCTCGCCGATCGTTACTCCGTCGAAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036250|gb|DR332003.1|DR332003
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036291|gb|DR332044.1|DR332044
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036299|gb|DR332052.1|DR332052
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036223|gb|DR331976.1|DR331976
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036241|gb|DR331994.1|DR331994
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036264|gb|DR332017.1|DR332017
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036259|gb|DR332012.1|DR332012
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCSGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCCATCAAAGCCGGCCAAATCEST: gi|86036278|gb|DR332031.1|DR332031
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTC-ATCAAAGCCGGCCAAATC
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036235|gb|DR331988.1|DR331988
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036249|gb|DR332002.1|DR332002
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036274|gb|DR332027.1|DR332027
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036270|gb|DR332023.1|DR332023
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: CTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAATGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036262|gb|DR332015.1|DR332015
genomic: CTCCGTCGAAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036267|gb|DR332020.1|DR332020
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036243|gb|DR331996.1|DR331996
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036266|gb|DR332019.1|DR332019
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036254|gb|DR332007.1|DR332007
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036288|gb|DR332041.1|DR332041
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036276|gb|DR332029.1|DR332029
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036227|gb|DR331980.1|DR331980
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036238|gb|DR331991.1|DR331991
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036212|gb|DR331965.1|DR331965
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGANNGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036240|gb|DR331993.1|DR331993
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036242|gb|DR331995.1|DR331995
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036220|gb|DR331973.1|DR331973
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAKGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036281|gb|DR332034.1|DR332034
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036284|gb|DR332037.1|DR332037
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036295|gb|DR332048.1|DR332048
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036282|gb|DR332035.1|DR332035
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036294|gb|DR332047.1|DR332047
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036218|gb|DR331971.1|DR331971
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036236|gb|DR331989.1|DR331989
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036246|gb|DR331999.1|DR331999
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036230|gb|DR331983.1|DR331983
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: CTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036213|gb|DR331966.1|DR331966
genomic: CTCCGTCGAAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036244|gb|DR331997.1|DR331997
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036289|gb|DR332042.1|DR332042
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036247|gb|DR332000.1|DR332000
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTCCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036219|gb|DR331972.1|DR331972
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|125170829|gb|EL194088.1|EL194088
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: CGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036258|gb|DR332011.1|DR332011
genomic: CGTCGAAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036297|gb|DR332050.1|DR332050
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036272|gb|DR332025.1|DR332025
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036222|gb|DR331975.1|DR331975
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036237|gb|DR331990.1|DR331990
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036265|gb|DR332018.1|DR332018
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCYATCAAAGCCGGCCAAATCEST: gi|86036234|gb|DR331987.1|DR331987
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTC-ATCAAAGCCGGCCAAATC
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036263|gb|DR332016.1|DR332016
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCMRAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|152034092|gb|BP867368.2|BP867368
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: CTTTCGTCTCTTCTCTGCTCGCCGATCGTTACTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036277|gb|DR332030.1|DR332030
genomic: CTTTCGTCTCTTCTCTGCTCGCCGATCGTTACTCCGTCGAAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036292|gb|DR332045.1|DR332045
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036214|gb|DR331967.1|DR331967
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTEST: gi|86036293|gb|DR332046.1|DR332046
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
EST: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTCTCCGTCGAAATCACCATG GCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
genomic: TCTCTTCTCTGCTCGCCGATCGTTACTCCGTC---G---AAATCACCATGgttactctct ... gtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCT
tcgctttgttgctcttaaagagagaatctaatttcgaaatgttgtgtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTGGAGGTGGAAAACAGAAGAAGAAG
atctaat putative branch site (score: 3)
tgttttc putative PPT
aatctaattt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gttactctctctcactctcgatctgtctatctgtatcgctttgttgctcttaaagagagaatctaatttcgaaatgttgtgtgttttcagGCGCCAAAGAAGGATAAGGTTCCACCACCGTCATCAAAGCCGGCCAAATCTGGAGGTGGAAAACAGAAGAAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG