1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
...gagttaccgccaattcgtcatctcctgtaatctctcgagctcaagactagtctgcttcgatcgctatctgatagtgtttttcttttttttgttctataagGTTGCTATCGAACACGTGGGACGCCCCAGTACTGAAGAACACAAAGCCTAACAATGAGTGTAGTTGGTTTTGATTTTGGAAACGAGAATTGCCTTGTTGC
species | Arabidopsis thaliana |
transcript | AT1G79920.2 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CCCAGATTTCGGTGGAAGCTTCCAGAACGCGAACCCCTCTCGCGATCCAG GTTGCTATCGAACACGTGGGACGCCCCAGTACTGAAGAACACAAAGCCTAAEST: gi|86070239|gb|DR365996.1|DR365996
genomic: CCCAGATTTCGGTGGAAGCTTCCAGAACGCGAACCCCTCTCGCGATCCAGgtatgctcta ... gttctataagGTTGCTATCGAACACGTGGGACGCCCCAGTACTGAAGAACACAAAGCCTAA
EST: CCCAGATTTCGGTGGAAGCTTCCAGAACGCGAACCCCTCTCGCGATCCAG GTTGCTATCGAACACGTGGGACGCCCCAGTACTGAAGAACACAAAGCCTAAEST: gi|86070240|gb|DR365997.1|DR365997
genomic: CCCAGATTTCGGTGGAAGCTTCCAGAACGCGAACCCCTCTCGCGATCCAGgtatgctcta ... gttctataagGTTGCTATCGAACACGTGGGACGCCCCAGTACTGAAGAACACAAAGCCTAA
EST: CCCAGATTTCGGTGGAAGCTTCCAGAACGCGAACCCCTCTCGCGATCCAG GTTGCTATAGAACACGTGGGACGCCCCAGTACTGAAGAACACAAAGCCTAA
genomic: CCCAGATTTCGGTGGAAGCTTCCAGAACGCGAACCCCTCTCGCGATCCAGgtatgctcta ... gttctataagGTTGCTATCGAACACGTGGGACGCCCCAGTACTGAAGAACACAAAGCCTAA
actagtctgcttcgatcgctatctgatagtgtttttcttttttttgttctataagGTTGCTATCGAACACGTGGGACGCCCCAGTACTGAAGAACACAAAGCCTAACAATGAGTGTAGTTGGTTTTGATTTTGGAAACGAGAATTGCCTTGTTGC
atctgat putative branch site (score: 4)
tgtttttctttttttt putative PPT
tttttcttttttttgt TA-rich tract