1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
...aatactggattattaaaaaaaaatattactaaaaatttcaatgatctagggtttcttcagatctttaaatttgttgctgattttactcgatttctcttagTCTGGGTGCAGTTGATGGAGCTCCAGCTATTTTGACCATCCAATTTCACCAGAAACCCTAAATCACAAGACTATGTAAGCATTTTCCTTATGGCTCTTCT
species | Arabidopsis thaliana |
transcript | AT1G08620.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CTGGGGAATATGGAAAAG TCTGGGTGCAGTTGATGGAGCTCCAGCTATTTTGACCATCCAATTTCACCA
genomic: CTGGGGAATATGGAAAAGgttaggtttc ... tttctcttagTCTGGGTGCAGTTGATGGAGCTCCAGCTATTTTGACCATCCAATTTCACCA
ctagggtttcttcagatctttaaatttgttgctgattttactcgatttctcttagTCTGGGTGCAGTTGATGGAGCTCCAGCTATTTTGACCATCCAATTTCACCAGAAACCCTAAATCACAAGACTATGTAAGCATTTTCCTTATGGCTCTTCT
tgctgat putative branch site (score: 3)
tttctctt putative PPT
atctttaaatttgtt TA-rich tract