HOME miRNA TABLE miRNA DEEP-SEQ IN SILICO TARGETS DEGRADOME TARGETS GOrilla INTRONS DOWNLOADS CONTACT




Malus Domestica - miRNA targets Filter by mature miRNA sequence or return to all        Help


name

mature homolog

mature

mature status

target

best UniProt hit

expectation

UPE

miRNA start-end

target start-end

inhibition

miRNA:target duplex
mdm-MIR34N ath-miR159a TTTGGATTGAAGGGAGCTCTA CONSERVED TC94134no hits with E-value < 1e-10 3 21.441 1 - 21 460 - 480 Cleavage 
ATCTCGAGGGAAGTTAGGTTT
:.:::::::::::: :::::
TGGAGCTCCCTTCACTCCAAT
mdm-MIR34N ath-miR159a TTTGGATTGAAGGGAGCTCTA CONSERVED TC94693no hits with E-value < 1e-10 3 14.723 1 - 21 805 - 825 Cleavage 
ATCTCGAGGGAAGTTAGGTTT
:::::.::::::.:::: ::.
TAGAGTTCCCTTTAATCAAAG
mdm-MIR34N ath-miR159a TTTGGATTGAAGGGAGCTCTA CONSERVED TC85105no hits with E-value < 1e-10 3 14.238 1 - 21 164 - 184 Cleavage 
ATCTCGAGGGAAGTTAGGTTT
: :.:::.::::::.:.::::
TCGGGCTTCCTTCAGTTCAAA
mdm-MIR34N ath-miR159a TTTGGATTGAAGGGAGCTCTA CONSERVED TC81025no hits with E-value < 1e-10 3 18.497 1 - 20 562 - 582 Cleavage 
TCTCGAGNGGAAGTTAGGTTT
.:::::: ::::::::.::::
GGAGCTCACCTTCAATTCAAA
mdm-MIR34N ath-miR159a TTTGGATTGAAGGGAGCTCTA CONSERVED TC78932no hits with E-value < 1e-10 3 17.712 1 - 20 584 - 604 Cleavage 
TCTCGAGNGGAAGTTAGGTTT
.:::::: ::::::::.::::
GGAGCTCACCTTCAATTCAAA
mdm-MIR34N ath-miR159a TTTGGATTGAAGGGAGCTCTA CONSERVED MDP0000240735no hits with E-value < 1e-10 0 13.984 1 - 21 899 - 919 Cleavage 
ATCTCGAGGGAAGTTAGGTTT
:::::::::::::::::::::
TAGAGCTCCCTTCAATCCAAA
mdm-MIR34N ath-miR159a TTTGGATTGAAGGGAGCTCTA CONSERVED MDP0000552725Transcription factor GAMYB
E-value: 9e-30
more		 2 20.686 1 - 21 409 - 429 Cleavage 
ATCTCGAGGGAAGTTAGGTTT
:.::::::: :::.:::::::
TGGAGCTCCATTCGATCCAAA
mdm-MIR34N ath-miR159a TTTGGATTGAAGGGAGCTCTA CONSERVED MDP0000280968no hits with E-value < 1e-10 2.5 15.923 1 - 21 443 - 463 Translation 
ATCTCGAGGGAAGTTAGGTTT
:::::::::. :.:::::::.
TAGAGCTCCTGTTAATCCAAG
mdm-MIR34N ath-miR159a TTTGGATTGAAGGGAGCTCTA CONSERVED MDP0000237596Transcription factor GAMYB
E-value: 5e-31
more		 2.5 23.182 1 - 21 400 - 420 Cleavage 
ATCTCGAGGGAAGTTAGGTTT
:.::::::: :::.::::::.
TGGAGCTCCATTCGATCCAAG
mdm-MIR34N ath-miR159a TTTGGATTGAAGGGAGCTCTA CONSERVED MDP0000319634Transcription factor GAMYB
E-value: 4e-30
more		 2.5 21.676 1 - 21 886 - 906 Cleavage 
ATCTCGAGGGAAGTTAGGTTT
:.::::::: :::.::::::.
TGGAGCTCCATTCGATCCAAG
mdm-MIR34N ath-miR159a TTTGGATTGAAGGGAGCTCTA CONSERVED MDP0000295781no hits with E-value < 1e-10 3 20.751 1 - 21 105 - 125 Cleavage 
ATCTCGAGGGAAGTTAGGTTT
 :::::::::::: ::..:::
AAGAGCTCCCTTCCATTTAAA
mdm-MIR34N ath-miR159a TTTGGATTGAAGGGAGCTCTA CONSERVED MDP0000144652no hits with E-value < 1e-10 3 22.986 1 - 21 1973 - 1993 Translation 
ATCTCGAGGGAAGTTAGGTTT
::::::::.:: ..::.::::
TAGAGCTCTCTATGATTCAAA
mdm-MIR34N ath-miR159a TTTGGATTGAAGGGAGCTCTA CONSERVED MDP0000141678no hits with E-value < 1e-10 3 22.986 1 - 21 1940 - 1960 Translation 
ATCTCGAGGGAAGTTAGGTTT
::::::::.:: ..::.::::
TAGAGCTCTCTATGATTCAAA
mdm-MIR34N ath-miR159a TTTGGATTGAAGGGAGCTCTA CONSERVED MDP0000312348no hits with E-value < 1e-10 3 22.054 1 - 20 882 - 902 Cleavage 
TCTCGAGGGAAGTTANGGTTT
:::::::.::::::: :::::
AGAGCTCTCTTCAATGCCAAA

Entries Per Page
Displaying Page of


KNOWN: 0 (0)
KNOWN and CONSERVED: 0 (0)
CONSERVED: 1 (14)
NOVEL: 0 (0)