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Malus Domestica - miRNA targets Filter by mature miRNA sequence or return to all        Help


name

mature homolog

mature

mature status

target

best UniProt hit

expectation

UPE

miRNA start-end

target start-end

inhibition

miRNA:target duplex
mdm-MIR171m zma-miR171f-3p TTGAGCCGTGCCAATATCACA KNOWN and CONSERVED TC63899no hits with E-value < 1e-10 2.5 15.929 1 - 21 7 - 27 Cleavage 
ACACTATAACCGTGCCGAGTT
 : :::::::::.::::::::
AGGGATATTGGCGCGGCTCAA
mdm-MIR171m zma-miR171f-3p TTGAGCCGTGCCAATATCACA KNOWN and CONSERVED TC80505no hits with E-value < 1e-10 2.5 15.993 1 - 21 478 - 498 Cleavage 
ACACTATAACCGTGCCGAGTT
 : :::::::::.::::::::
AGGGATATTGGCGCGGCTCAA
mdm-MIR171m zma-miR171f-3p TTGAGCCGTGCCAATATCACA KNOWN and CONSERVED MDP0000784909Scarecrow-like protein 6
E-value: 3e-111
more		 2.5 23.246 1 - 21 1224 - 1244 Cleavage 
ACACTATAACCGTGCCGAGTT
 : :::::::::.::::::::
AGGGATATTGGCGCGGCTCAA
mdm-MIR171m zma-miR171f-3p TTGAGCCGTGCCAATATCACA KNOWN and CONSERVED MDP0000275704Scarecrow-like protein 6
E-value: 1e-99
more		 2.5 18.268 1 - 21 1353 - 1373 Cleavage 
ACACTATAACCGTGCCGAGTT
 : :::::::::.::::::::
AGGGATATTGGCGCGGCTCAA
mdm-MIR171m zma-miR171f-3p TTGAGCCGTGCCAATATCACA KNOWN and CONSERVED MDP0000151144Scarecrow-like protein 6
E-value: 1e-100
more		 2.5 22.415 1 - 21 1677 - 1697 Cleavage 
ACACTATAACCGTGCCGAGTT
 : :::::::::.::::::::
AGGGATATTGGCGCGGCTCAA
mdm-MIR171m zma-miR171f-3p TTGAGCCGTGCCAATATCACA KNOWN and CONSERVED MDP0000274120Scarecrow-like protein 6
E-value: 1e-97
more		 2.5 15.993 1 - 21 2205 - 2225 Cleavage 
ACACTATAACCGTGCCGAGTT
 : :::::::::.::::::::
AGGGATATTGGCGCGGCTCAA

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KNOWN: 0 (0)
KNOWN and CONSERVED: 1 (6)
CONSERVED: 0 (0)
NOVEL: 0 (0)