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Malus Domestica - miRNA targets Filter by mature miRNA sequence or return to all        Help


name

mature homolog

mature

mature status

target

best UniProt hit

expectation

UPE

miRNA start-end

target start-end

inhibition

miRNA:target duplex
mdm-MIR136N ctr-miR171 TTGAGCCGCGTCAATATCTCC CONSERVED TC63899no hits with E-value < 1e-10 2 15.929 1 - 21 7 - 27 Cleavage 
CCTCTATAACTGCGCCGAGTT
 :.:::::::.::::::::::
AGGGATATTGGCGCGGCTCAA
mdm-MIR136N ctr-miR171 TTGAGCCGCGTCAATATCTCC CONSERVED TC80505no hits with E-value < 1e-10 2 15.993 1 - 21 478 - 498 Cleavage 
CCTCTATAACTGCGCCGAGTT
 :.:::::::.::::::::::
AGGGATATTGGCGCGGCTCAA
mdm-MIR136N ctr-miR171 TTGAGCCGCGTCAATATCTCC CONSERVED MDP0000784909Scarecrow-like protein 6
E-value: 3e-111
more		 2 23.246 1 - 21 1224 - 1244 Cleavage 
CCTCTATAACTGCGCCGAGTT
 :.:::::::.::::::::::
AGGGATATTGGCGCGGCTCAA
mdm-MIR136N ctr-miR171 TTGAGCCGCGTCAATATCTCC CONSERVED MDP0000275704Scarecrow-like protein 6
E-value: 1e-99
more		 2 18.268 1 - 21 1353 - 1373 Cleavage 
CCTCTATAACTGCGCCGAGTT
 :.:::::::.::::::::::
AGGGATATTGGCGCGGCTCAA
mdm-MIR136N ctr-miR171 TTGAGCCGCGTCAATATCTCC CONSERVED MDP0000151144Scarecrow-like protein 6
E-value: 1e-100
more		 2 22.415 1 - 21 1677 - 1697 Cleavage 
CCTCTATAACTGCGCCGAGTT
 :.:::::::.::::::::::
AGGGATATTGGCGCGGCTCAA
mdm-MIR136N ctr-miR171 TTGAGCCGCGTCAATATCTCC CONSERVED MDP0000274120Scarecrow-like protein 6
E-value: 1e-97
more		 2 15.993 1 - 21 2205 - 2225 Cleavage 
CCTCTATAACTGCGCCGAGTT
 :.:::::::.::::::::::
AGGGATATTGGCGCGGCTCAA
mdm-MIR136N ctr-miR171 TTGAGCCGCGTCAATATCTCC CONSERVED MDP0000120215no hits with E-value < 1e-10 3 12.778 1 - 21 40 - 60 Cleavage 
CCTCTATAACTGCGCCGAGTT
  :::::::::::.::::.::
CAAGATATTGACGTGGCTTAA
mdm-MIR136N ctr-miR171 TTGAGCCGCGTCAATATCTCC CONSERVED MDP0000263189Putative pentatricopeptide repeat-containing protein At5g13230,
E-value: 0.0
more		 3 16.218 1 - 21 1543 - 1563 Translation 
CCTCTATAACTGCGCCGAGTT
::::::::::: : :::::..
GGAGATATTGAGGAGGCTCGG

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KNOWN: 0 (0)
KNOWN and CONSERVED: 0 (0)
CONSERVED: 1 (8)
NOVEL: 0 (0)