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Malus Domestica - miRNA targets Filter by mature miRNA sequence or return to all        Help


name

mature homolog

mature

mature status

target

best UniProt hit

expectation

UPE

miRNA start-end

target start-end

inhibition

miRNA:target duplex
mdm-MIR398a ahy-miR398 TGTGTTCTCAGGTCACCCCTT KNOWN and CONSERVED GO561483no hits with E-value < 1e-10 1.5 19.324 1 - 21 330 - 350 Cleavage 
TTCCCCACTGGACTCTTGTGT
: ::::::::.::::::::::
ATGGGGTGACTTGAGAACACA
mdm-MIR398a ahy-miR398 TGTGTTCTCAGGTCACCCCTT KNOWN and CONSERVED GO542052no hits with E-value < 1e-10 2.5 17.986 1 - 21 79 - 99 Cleavage 
TTCCCCACTGGACTCTTGTGT
:::::::: ::::::: ::::
AAGGGGTGTCCTGAGATCACA
mdm-MIR398a ahy-miR398 TGTGTTCTCAGGTCACCCCTT KNOWN and CONSERVED CV997584no hits with E-value < 1e-10 3 16.611 1 - 21 132 - 152 Cleavage 
TTCCCCACTGGACTCTTGTGT
:::::::: ::::::: :::.
AAGGGGTGTCCTGAGATCACG
mdm-MIR398a ahy-miR398 TGTGTTCTCAGGTCACCCCTT KNOWN and CONSERVED TC91505no hits with E-value < 1e-10 3 15.861 1 - 21 84 - 104 Cleavage 
TTCCCCACTGGACTCTTGTGT
:::::::: ::::::: :::.
AAGGGGTGTCCTGAGATCACG
mdm-MIR398a ahy-miR398 TGTGTTCTCAGGTCACCCCTT KNOWN and CONSERVED TC60000no hits with E-value < 1e-10 3 16.044 1 - 21 160 - 180 Cleavage 
TTCCCCACTGGACTCTTGTGT
:::::::: ::::::: :::.
AAGGGGTGTCCTGAGATCACG
mdm-MIR398a ahy-miR398 TGTGTTCTCAGGTCACCCCTT KNOWN and CONSERVED TC76955no hits with E-value < 1e-10 3 24.376 1 - 21 339 - 359 Cleavage 
TTCCCCACTGGACTCTTGTGT
::: :: ::..::::::::::
AAGCGGGGATTTGAGAACACA
mdm-MIR398a ahy-miR398 TGTGTTCTCAGGTCACCCCTT KNOWN and CONSERVED MDP0000152817Probable nucleoredoxin 1
E-value: 4e-175
more		 3 18.384 1 - 21 1753 - 1773 Cleavage 
TTCCCCACTGGACTCTTGTGT
::::::::.:::::::: ..:
AAGGGGTGGCCTGAGAAAGTA
mdm-MIR398a ahy-miR398 TGTGTTCTCAGGTCACCCCTT KNOWN and CONSERVED MDP0000925311no hits with E-value < 1e-10 3 21.214 1 - 21 248 - 268 Translation 
TTCCCCACTGGACTCTTGTGT
:: ::::::..: ::::::::
AATGGGTGATTTAAGAACACA
mdm-MIR398a ahy-miR398 TGTGTTCTCAGGTCACCCCTT KNOWN and CONSERVED MDP0000148985Triacylglycerol lipase 1
E-value: 5e-147
more		 3 24.376 1 - 21 540 - 560 Cleavage 
TTCCCCACTGGACTCTTGTGT
::: :: ::..::::::::::
AAGCGGGGATTTGAGAACACA

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KNOWN: 0 (0)
KNOWN and CONSERVED: 1 (9)
CONSERVED: 0 (0)
NOVEL: 0 (0)