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Malus Domestica - miRNA targets Filter by mature miRNA sequence or return to all        Help


name

mature homolog

mature

mature status

target

best UniProt hit

expectation

UPE

miRNA start-end

target start-end

inhibition

miRNA:target duplex
mdm-MIR168a None TGGTGCAGGTCGGGAACCGCT KNOWN and CONSERVED CN901684no hits with E-value < 1e-10 1 24.393 1 - 21 90 - 110 Cleavage 
TCGCCAAGGGCTGGACGTGGT
: :::::::::::::::::::
ATCGGTTCCCGACCTGCACCA
mdm-MIR168a None TGGTGCAGGTCGGGAACCGCT KNOWN and CONSERVED TC68636no hits with E-value < 1e-10 3 23.634 1 - 21 1087 - 1107 Translation 
TCGCCAAGGGCTGGACGTGGT
::::::::.: . ::::::::
AGCGGTTCTCTGACTGCACCA
mdm-MIR168a None TGGTGCAGGTCGGGAACCGCT KNOWN and CONSERVED MDP0000161046Protein argonaute 1
E-value: 0.0
more		 1 24.393 1 - 21 834 - 854 Cleavage 
TCGCCAAGGGCTGGACGTGGT
: :::::::::::::::::::
ATCGGTTCCCGACCTGCACCA
mdm-MIR168a None TGGTGCAGGTCGGGAACCGCT KNOWN and CONSERVED MDP0000314537no hits with E-value < 1e-10 3 18.886 1 - 21 16 - 36 Cleavage 
TCGCCAAGGGCTGGACGTGGT
.:::::: . :::::::::::
GGCGGTTGTGGACCTGCACCA

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KNOWN: 0 (0)
KNOWN and CONSERVED: 1 (4)
CONSERVED: 0 (0)
NOVEL: 0 (0)