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Malus Domestica - miRNA targets Filter by mature miRNA sequence or return to all        Help


name

mature homolog

mature

mature status

target

best UniProt hit

expectation

UPE

miRNA start-end

target start-end

inhibition

miRNA:target duplex
mdm-MIR85N None TGGCACCAAAGTCACCACCCG NOVEL CO753336no hits with E-value < 1e-10 2.5 24.096 1 - 21 134 - 154 Cleavage 
GCCCACCACTGAAACCACGGT
. ::::::::::::::::::.
TTGGTGGTGACTTTGGTGCCG
mdm-MIR85N None TGGCACCAAAGTCACCACCCG NOVEL TC60676no hits with E-value < 1e-10 3 24.521 1 - 21 1177 - 1197 Cleavage 
GCCCACCACTGAAACCACGGT
.  ::::::::::::::::::
TTAGTGGTGACTTTGGTGCCA
mdm-MIR85N None TGGCACCAAAGTCACCACCCG NOVEL TC60064no hits with E-value < 1e-10 3 24.346 1 - 21 1729 - 1749 Cleavage 
GCCCACCACTGAAACCACGGT
  ::::::::::::::::::
GTGGTGGTGACTTTGGTGCCC
mdm-MIR85N None TGGCACCAAAGTCACCACCCG NOVEL TC72201no hits with E-value < 1e-10 2 20.026 1 - 21 495 - 515 Cleavage 
GCCCACCACTGAAACCACGGT
: :::::: ::::::::::::
CTGGTGGTTACTTTGGTGCCA
mdm-MIR85N None TGGCACCAAAGTCACCACCCG NOVEL TC85184no hits with E-value < 1e-10 2.5 18.705 1 - 21 437 - 457 Cleavage 
GCCCACCACTGAAACCACGGT
: :::::: .:::::::::::
CTGGTGGTAGCTTTGGTGCCA
mdm-MIR85N None TGGCACCAAAGTCACCACCCG NOVEL MDP0000699845Polyphenol oxidase, chloroplastic
E-value: 0.0
more		 3 24.346 1 - 21 1939 - 1959 Cleavage 
GCCCACCACTGAAACCACGGT
  ::::::::::::::::::
GTGGTGGTGACTTTGGTGCCC
mdm-MIR85N None TGGCACCAAAGTCACCACCCG NOVEL MDP0000259556Uncharacterized protein At1g05835
E-value: 5e-25
more		 3 20.995 1 - 21 1106 - 1126 Translation 
GCCCACCACTGAAACCACGGT
.::::::::: : ::::::.:
TGGGTGGTGAATATGGTGCTA

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KNOWN: 0 (0)
KNOWN and CONSERVED: 0 (0)
CONSERVED: 0 (0)
NOVEL: 1 (7)