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Malus Domestica - miRNA targets Filter by mature miRNA sequence or return to all        Help


name

mature homolog

mature

mature status

target

best UniProt hit

expectation

UPE

miRNA start-end

target start-end

inhibition

miRNA:target duplex
mdm-MIR164c gma-miR164b TGGAGAAGCAGGGCACGTGCA KNOWN and CONSERVED CN877807no hits with E-value < 1e-10 2.5 11.419 1 - 21 121 - 141 Cleavage 
ACGTGCACGGGACGAAGAGGT
  .::::::::::::::::::
ATTACGTGCCCTGCTTCTCCA
mdm-MIR164c gma-miR164b TGGAGAAGCAGGGCACGTGCA KNOWN and CONSERVED TC81773no hits with E-value < 1e-10 2 10.713 1 - 21 163 - 183 Cleavage 
ACGTGCACGGGACGAAGAGGT
 ::: ::::::::::::::::
AGCAAGTGCCCTGCTTCTCCA
mdm-MIR164c gma-miR164b TGGAGAAGCAGGGCACGTGCA KNOWN and CONSERVED TC64461no hits with E-value < 1e-10 2 16.69 1 - 21 684 - 704 Cleavage 
ACGTGCACGGGACGAAGAGGT
 ::: ::::::::::::::::
AGCAAGTGCCCTGCTTCTCCA
mdm-MIR164c gma-miR164b TGGAGAAGCAGGGCACGTGCA KNOWN and CONSERVED TC87311no hits with E-value < 1e-10 2 20.562 1 - 21 183 - 203 Cleavage 
ACGTGCACGGGACGAAGAGGT
::::: :::.::::::::.::
TGCACTTGCTCTGCTTCTTCA
mdm-MIR164c gma-miR164b TGGAGAAGCAGGGCACGTGCA KNOWN and CONSERVED CO051653no hits with E-value < 1e-10 3 7.547 1 - 21 139 - 159 Cleavage 
ACGTGCACGGGACGAAGAGGT
  .:::::.::::::::::::
ATTACGTGTCCTGCTTCTCCA
mdm-MIR164c gma-miR164b TGGAGAAGCAGGGCACGTGCA KNOWN and CONSERVED MDP0000310981Protein CUP-SHAPED COTYLEDON 2
E-value: 2e-83
more		 2 13.574 1 - 21 1097 - 1117 Cleavage 
ACGTGCACGGGACGAAGAGGT
 :::::::.::::.:::::::
AGCACGTGTCCTGTTTCTCCA
mdm-MIR164c gma-miR164b TGGAGAAGCAGGGCACGTGCA KNOWN and CONSERVED MDP0000121265NAC domain-containing protein 100
E-value: 4e-113
more		 2.5 7.473 1 - 21 944 - 964 Cleavage 
ACGTGCACGGGACGAAGAGGT
  .::::::::::::::::::
ATTACGTGCCCTGCTTCTCCA
mdm-MIR164c gma-miR164b TGGAGAAGCAGGGCACGTGCA KNOWN and CONSERVED MDP0000911724NAC domain-containing protein 100
E-value: 5e-116
more		 2.5 8.941 1 - 21 944 - 964 Cleavage 
ACGTGCACGGGACGAAGAGGT
  .::::::::::::::::::
ATTACGTGCCCTGCTTCTCCA
mdm-MIR164c gma-miR164b TGGAGAAGCAGGGCACGTGCA KNOWN and CONSERVED MDP0000298182NAC domain-containing protein 21/22
E-value: 2e-89
more		 2 11.241 1 - 21 917 - 937 Cleavage 
ACGTGCACGGGACGAAGAGGT
 ::: ::::::::::::::::
AGCAAGTGCCCTGCTTCTCCA
mdm-MIR164c gma-miR164b TGGAGAAGCAGGGCACGTGCA KNOWN and CONSERVED MDP0000528658NAC domain-containing protein 21/22
E-value: 3e-66
more		 2 17.913 1 - 21 712 - 732 Cleavage 
ACGTGCACGGGACGAAGAGGT
 ::: ::::::::::::::::
AGCAAGTGCCCTGCTTCTCCA
mdm-MIR164c gma-miR164b TGGAGAAGCAGGGCACGTGCA KNOWN and CONSERVED MDP0000269941Probable glycerophosphoryl diester phosphodiesterase 2
E-value: 5e-169
more		 2 19.197 1 - 21 324 - 344 Cleavage 
ACGTGCACGGGACGAAGAGGT
::::: :::.::::::::.::
TGCACTTGCTCTGCTTCTTCA
mdm-MIR164c gma-miR164b TGGAGAAGCAGGGCACGTGCA KNOWN and CONSERVED MDP0000283465Uncharacterized protein C19orf29
E-value: 2e-93
more		 3 19.487 1 - 21 3039 - 3059 Cleavage 
ACGTGCACGGGACGAAGAGGT
::::  ::::::: :::::::
TGCAAATGCCCTGGTTCTCCA

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KNOWN: 0 (0)
KNOWN and CONSERVED: 1 (12)
CONSERVED: 0 (0)
NOVEL: 0 (0)