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Malus Domestica - miRNA targets Filter by mature miRNA sequence or return to all        Help


name

mature homolog

mature

mature status

target

best UniProt hit

expectation

UPE

miRNA start-end

target start-end

inhibition

miRNA:target duplex
mdm-MIR37N gma-miR530a TGCATTTGCACCTGCACTTGT CONSERVED TC91229no hits with E-value < 1e-10 2.5 20.308 1 - 21 526 - 546 Cleavage 
TGTTCACGTCCACGTTTACGT
:. :: :::::::::::::::
ATCAGCGCAGGTGCAAATGCA
mdm-MIR37N gma-miR530a TGCATTTGCACCTGCACTTGT CONSERVED TC85958no hits with E-value < 1e-10 3 21.475 1 - 21 545 - 565 Translation 
TGTTCACGTCCACGTTTACGT
.:::::::.  ::::::::::
GCAAGTGCGATTGCAAATGCA
mdm-MIR37N gma-miR530a TGCATTTGCACCTGCACTTGT CONSERVED MDP0000196131no hits with E-value < 1e-10 1.5 16.924 1 - 21 664 - 684 Cleavage 
TGTTCACGTCCACGTTTACGT
 ::.:::::::::::::::::
TCAGGTGCAGGTGCAAATGCA
mdm-MIR37N gma-miR530a TGCATTTGCACCTGCACTTGT CONSERVED MDP0000147872no hits with E-value < 1e-10 1.5 19.288 1 - 21 529 - 549 Cleavage 
TGTTCACGTCCACGTTTACGT
 ::.:::::::::::::::::
TCAGGTGCAGGTGCAAATGCA
mdm-MIR37N gma-miR530a TGCATTTGCACCTGCACTTGT CONSERVED MDP0000198217Probable receptor-like protein kinase At1g67000
E-value: 5e-95
more		 3 21.845 1 - 21 1024 - 1044 Cleavage 
TGTTCACGTCCACGTTTACGT
.::.:::::::::::..:::
GCAGGTGCAGGTGCAGGTGCT
mdm-MIR37N gma-miR530a TGCATTTGCACCTGCACTTGT CONSERVED MDP0000424117no hits with E-value < 1e-10 2 15.393 1 - 21 396 - 416 Cleavage 
TGTTCACGTCCACGTTTACGT
:: :::: :::::::::::::
ACTAGTGAAGGTGCAAATGCA
mdm-MIR37N gma-miR530a TGCATTTGCACCTGCACTTGT CONSERVED MDP0000653901no hits with E-value < 1e-10 2 15.393 1 - 21 396 - 416 Cleavage 
TGTTCACGTCCACGTTTACGT
:: :::: :::::::::::::
ACTAGTGAAGGTGCAAATGCA
mdm-MIR37N gma-miR530a TGCATTTGCACCTGCACTTGT CONSERVED MDP0000303400no hits with E-value < 1e-10 3 22.247 1 - 21 948 - 968 Cleavage 
TGTTCACGTCCACGTTTACGT
.::.::::: :::::..::::
GCAGGTGCAAGTGCAGGTGCA
mdm-MIR37N gma-miR530a TGCATTTGCACCTGCACTTGT CONSERVED MDP0000269890Transcription factor bHLH80
E-value: 4e-27
more		 2.5 17.229 1 - 21 995 - 1015 Cleavage 
TGTTCACGTCCACGTTTACGT
:. :: :::::::::::::::
ATCAGCGCAGGTGCAAATGCA
mdm-MIR37N gma-miR530a TGCATTTGCACCTGCACTTGT CONSERVED MDP0000236223Polypyrimidine tract-binding protein homolog 2
E-value: 7e-144
more		 2.5 17.778 1 - 21 646 - 666 Cleavage 
TGTTCACGTCCACGTTTACGT
:::: :: :::::::.:::::
ACAATTGAAGGTGCAGATGCA
mdm-MIR37N gma-miR530a TGCATTTGCACCTGCACTTGT CONSERVED MDP0000274672Polypyrimidine tract-binding protein homolog 2
E-value: 1e-142
more		 2.5 17.255 1 - 21 1000 - 1020 Cleavage 
TGTTCACGTCCACGTTTACGT
:::: :: :::::::.:::::
ACAATTGAAGGTGCAGATGCA
mdm-MIR37N gma-miR530a TGCATTTGCACCTGCACTTGT CONSERVED MDP0000673889no hits with E-value < 1e-10 3 18.654 1 - 21 174 - 195 Translation 
TGTTCACGTCCACNGTTTACGT
..:.::::::::: ::::::::
GTAGGTGCAGGTGTCAAATGCA
mdm-MIR37N gma-miR530a TGCATTTGCACCTGCACTTGT CONSERVED MDP0000273723no hits with E-value < 1e-10 3 16.627 1 - 21 174 - 195 Translation 
TGTTCACGTCCACNGTTTACGT
..:.::::::::: ::::::::
GTAGGTGCAGGTGTCAAATGCA

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KNOWN: 0 (0)
KNOWN and CONSERVED: 0 (0)
CONSERVED: 1 (13)
NOVEL: 0 (0)