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Malus Domestica - miRNA targets Filter by mature miRNA sequence or return to all        Help


name

mature homolog

mature

mature status

target

best UniProt hit

expectation

UPE

miRNA start-end

target start-end

inhibition

miRNA:target duplex
mdm-MIR171d zma-miR171a-3p TGATTGAGCCGCGCCAATATC KNOWN TC63899no hits with E-value < 1e-10 0 15.929 1 - 21 10 - 30 Cleavage 
CTATAACCGCGCCGAGTTAGT
:::::::::::::::::::::
GATATTGGCGCGGCTCAATCA
mdm-MIR171d zma-miR171a-3p TGATTGAGCCGCGCCAATATC KNOWN TC80505no hits with E-value < 1e-10 0 16.632 1 - 21 481 - 501 Cleavage 
CTATAACCGCGCCGAGTTAGT
:::::::::::::::::::::
GATATTGGCGCGGCTCAATCA
mdm-MIR171d zma-miR171a-3p TGATTGAGCCGCGCCAATATC KNOWN MDP0000784909Scarecrow-like protein 6
E-value: 3e-111
more		 0 24.327 1 - 21 1227 - 1247 Cleavage 
CTATAACCGCGCCGAGTTAGT
:::::::::::::::::::::
GATATTGGCGCGGCTCAATCA
mdm-MIR171d zma-miR171a-3p TGATTGAGCCGCGCCAATATC KNOWN MDP0000275704Scarecrow-like protein 6
E-value: 1e-99
more		 0 17.713 1 - 21 1356 - 1376 Cleavage 
CTATAACCGCGCCGAGTTAGT
:::::::::::::::::::::
GATATTGGCGCGGCTCAATCA
mdm-MIR171d zma-miR171a-3p TGATTGAGCCGCGCCAATATC KNOWN MDP0000151144Scarecrow-like protein 6
E-value: 1e-100
more		 0 22.116 1 - 21 1680 - 1700 Cleavage 
CTATAACCGCGCCGAGTTAGT
:::::::::::::::::::::
GATATTGGCGCGGCTCAATCA
mdm-MIR171d zma-miR171a-3p TGATTGAGCCGCGCCAATATC KNOWN MDP0000274120Scarecrow-like protein 6
E-value: 1e-97
more		 0 16.632 1 - 21 2208 - 2228 Cleavage 
CTATAACCGCGCCGAGTTAGT
:::::::::::::::::::::
GATATTGGCGCGGCTCAATCA
mdm-MIR171d zma-miR171a-3p TGATTGAGCCGCGCCAATATC KNOWN MDP0000120215no hits with E-value < 1e-10 2.5 12.15 1 - 21 43 - 63 Cleavage 
CTATAACCGCGCCGAGTTAGT
::::::: ::.::::.::::.
GATATTGACGTGGCTTAATCG
mdm-MIR171d zma-miR171a-3p TGATTGAGCCGCGCCAATATC KNOWN MDP0000625181no hits with E-value < 1e-10 3 11.754 1 - 21 53 - 73 Cleavage 
CTATAACCGCGCCGAGTTAGT
::::::: .:.::.:.:::::
GATATTGATGTGGTTTAATCA

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KNOWN: 1 (8)
KNOWN and CONSERVED: 0 (0)
CONSERVED: 0 (0)
NOVEL: 0 (0)