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Malus Domestica - miRNA targets Filter by mature miRNA sequence or return to all        Help


name

mature homolog

mature

mature status

target

best UniProt hit

expectation

UPE

miRNA start-end

target start-end

inhibition

miRNA:target duplex
mdm-MIR535d mdm-miR535d TGACGACGAGAGAGAGCACGC KNOWN CV629858no hits with E-value < 1e-10 3 11.068 1 - 21 9 - 29 Cleavage 
CGCACGAGAGAGAGCAGCAGT
::::: :::.:::: ::::::
GCGTGGTCTTTCTCCTCGTCA
mdm-MIR535d mdm-miR535d TGACGACGAGAGAGAGCACGC KNOWN MDP0000173587no hits with E-value < 1e-10 2.5 19.779 1 - 21 611 - 631 Cleavage 
CGCACGAGAGAGAGCAGCAGT
:::::::::::::: :::::
GCGTGCTCTCTCTCCTCGTCT
mdm-MIR535d mdm-miR535d TGACGACGAGAGAGAGCACGC KNOWN MDP0000269528Pentatricopeptide repeat-containing protein At2g37320
E-value: 4e-57
more		 2.5 20.75 1 - 21 680 - 701 Translation 
CGCACGAGAGANGAGCAGCAGT
::::::::::: ::.:::::::
GCGTGCTCTCTTCTTGTCGTCA
mdm-MIR535d mdm-miR535d TGACGACGAGAGAGAGCACGC KNOWN MDP0000277005Pentatricopeptide repeat-containing protein At2g37320
E-value: 1e-37
more		 2.5 14.627 1 - 21 680 - 701 Translation 
CGCACGAGAGANGAGCAGCAGT
::::::::::: ::.:::::::
GCGTGCTCTCTTCTTGTCGTCA

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KNOWN: 1 (4)
KNOWN and CONSERVED: 0 (0)
CONSERVED: 0 (0)
NOVEL: 0 (0)