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Malus Domestica - miRNA targets Filter by mature miRNA sequence or return to all        Help


name

mature homolog

mature

mature status

target

best UniProt hit

expectation

UPE

miRNA start-end

target start-end

inhibition

miRNA:target duplex
mdm-MIR21N None TGACCAACATATATGGGCCGT NOVEL CN860217no hits with E-value < 1e-10 3 17.919 1 - 21 387 - 407 Cleavage 
TGCCGGGTATATACAACCAGT
::: .:::::::::::::: :
ACGCTCCATATATGTTGGTAA
mdm-MIR21N None TGACCAACATATATGGGCCGT NOVEL CN897670no hits with E-value < 1e-10 3 20.269 1 - 21 220 - 240 Translation 
TGCCGGGTATATACAACCAGT
::::.::: ::. ::::::::
ACGGTCCAAATGCGTTGGTCA
mdm-MIR21N None TGACCAACATATATGGGCCGT NOVEL GO542863no hits with E-value < 1e-10 3 22.336 1 - 21 496 - 516 Cleavage 
TGCCGGGTATATACAACCAGT
..:::: : ::::::::::::
GTGGCCGAGATATGTTGGTCA
mdm-MIR21N None TGACCAACATATATGGGCCGT NOVEL MDP0000290834no hits with E-value < 1e-10 3 14.631 1 - 21 156 - 176 Translation 
TGCCGGGTATATACAACCAGT
::::.::: ::. ::::::::
ACGGTCCAAATGCGTTGGTCA
mdm-MIR21N None TGACCAACATATATGGGCCGT NOVEL MDP0000140291no hits with E-value < 1e-10 3 14.434 1 - 21 158 - 178 Translation 
TGCCGGGTATATACAACCAGT
::::.::: ::. ::::::::
ACGGTCCAAATGCGTTGGTCA
mdm-MIR21N None TGACCAACATATATGGGCCGT NOVEL MDP0000520603no hits with E-value < 1e-10 3 15.662 1 - 21 157 - 177 Translation 
TGCCGGGTATATACAACCAGT
::::.::: ::. ::::::::
ACGGTCCAAATGCGTTGGTCA

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KNOWN: 0 (0)
KNOWN and CONSERVED: 0 (0)
CONSERVED: 0 (0)
NOVEL: 1 (6)