Malus Domestica - miRNA targets

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Malus Domestica - miRNA targets Filter by mature miRNA sequence or return to all Help

name	mature homolog	mature	mature status	target	best UniProt hit	expectation	UPE	miRNA start-end	target start-end	inhibition	miRNA:target duplex
mdm-MIR156h	gma-miR156q	TGACAGAAGAGAGTGAGCAC	KNOWN	CO051680	no hits with E-value < 1e-10	0.5	16.758	1 - 20	19 - 38	Cleavage	CACGAGTGAGAGAAGACAGT ::::::.::::::::::::: GTGCTCGCTCTCTTCTGTCA
mdm-MIR156h	gma-miR156q	TGACAGAAGAGAGTGAGCAC	KNOWN	CO868185	no hits with E-value < 1e-10	1	21.256	1 - 20	526 - 545	Cleavage	CACGAGTGAGAGAAGACAGT :::::: ::::::::::::: GTGCTCTCTCTCTTCTGTCA
mdm-MIR156h	gma-miR156q	TGACAGAAGAGAGTGAGCAC	KNOWN	TC69221	no hits with E-value < 1e-10	1	22.301	1 - 20	257 - 276	Cleavage	CACGAGTGAGAGAAGACAGT :::::: ::::::::::::: GTGCTCTCTCTCTTCTGTCA
mdm-MIR156h	gma-miR156q	TGACAGAAGAGAGTGAGCAC	KNOWN	TC92994	no hits with E-value < 1e-10	1	14.827	1 - 20	540 - 559	Cleavage	CACGAGTGAGAGAAGACAGT :::::: ::::::::::::: GTGCTCTCTCTCTTCTGTCA
mdm-MIR156h	gma-miR156q	TGACAGAAGAGAGTGAGCAC	KNOWN	TC74079	no hits with E-value < 1e-10	1	14.857	1 - 20	416 - 435	Cleavage	CACGAGTGAGAGAAGACAGT :::::: ::::::::::::: GTGCTCTCTCTCTTCTGTCA
mdm-MIR156h	gma-miR156q	TGACAGAAGAGAGTGAGCAC	KNOWN	TC60068	no hits with E-value < 1e-10	1	12.258	1 - 20	323 - 342	Cleavage	CACGAGTGAGAGAAGACAGT :::::: ::::::::::::: GTGCTCTCTCTCTTCTGTCA
mdm-MIR156h	gma-miR156q	TGACAGAAGAGAGTGAGCAC	KNOWN	TC76043	no hits with E-value < 1e-10	1	23.294	1 - 20	964 - 983	Cleavage	CACGAGTGAGAGAAGACAGT :::::: ::::::::::::: GTGCTCTCTCTCTTCTGTCA
mdm-MIR156h	gma-miR156q	TGACAGAAGAGAGTGAGCAC	KNOWN	TC60574	no hits with E-value < 1e-10	1	21.579	1 - 20	872 - 891	Cleavage	CACGAGTGAGAGAAGACAGT :::::: ::::::::::::: GTGCTCTCTCTCTTCTGTCA
mdm-MIR156h	gma-miR156q	TGACAGAAGAGAGTGAGCAC	KNOWN	TC90483	no hits with E-value < 1e-10	2	10.039	1 - 20	156 - 175	Cleavage	CACGAGTGAGAGAAGACAGT ::::: ::::::::::::: ATGCTCTCTCTCTTCTGTCA
mdm-MIR156h	gma-miR156q	TGACAGAAGAGAGTGAGCAC	KNOWN	TC70329	no hits with E-value < 1e-10	2	14.406	1 - 20	614 - 633	Cleavage	CACGAGTGAGAGAAGACAGT ::::: ::::::::::::: ATGCTCCCTCTCTTCTGTCA
mdm-MIR156h	gma-miR156q	TGACAGAAGAGAGTGAGCAC	KNOWN	TC69101	no hits with E-value < 1e-10	2	14.761	1 - 20	642 - 661	Cleavage	CACGAGTGAGAGAAGACAGT ::::: ::::::::::::: ATGCTCCCTCTCTTCTGTCA
mdm-MIR156h	gma-miR156q	TGACAGAAGAGAGTGAGCAC	KNOWN	TC80445	no hits with E-value < 1e-10	2	9.878	1 - 20	616 - 635	Cleavage	CACGAGTGAGAGAAGACAGT ::::: ::::::::::::: ATGCTCTCTCTCTTCTGTCA
mdm-MIR156h	gma-miR156q	TGACAGAAGAGAGTGAGCAC	KNOWN	TC87628	no hits with E-value < 1e-10	3	10.647	1 - 20	696 - 715	Cleavage	CACGAGTGAGAGAAGACAGT :::.:.:.:.::::.:::.: GTGTTTATTTTCTTTTGTTA
mdm-MIR156h	gma-miR156q	TGACAGAAGAGAGTGAGCAC	KNOWN	TC62510	no hits with E-value < 1e-10	2	17.22	1 - 20	813 - 832	Translation	CACGAGTGAGAGAAGACAGT :::::: :: :::::::::: GTGCTCTCTATCTTCTGTCA
mdm-MIR156h	gma-miR156q	TGACAGAAGAGAGTGAGCAC	KNOWN	TC74550	no hits with E-value < 1e-10	2	18.858	1 - 20	495 - 514	Translation	CACGAGTGAGAGAAGACAGT :::::: :: :::::::::: GTGCTCTCTATCTTCTGTCA
mdm-MIR156h	gma-miR156q	TGACAGAAGAGAGTGAGCAC	KNOWN	GO533646	no hits with E-value < 1e-10	3	14.759	1 - 20	22 - 41	Cleavage	CACGAGTGAGAGAAGACAGT :: :::::::::::. :::: GTTCTCACTCTCTTTGGTCA
mdm-MIR156h	gma-miR156q	TGACAGAAGAGAGTGAGCAC	KNOWN	MDP0000589558	Squamosa promoter-binding-like protein 6 E-value: 1e-38 more	0.5	18.686	1 - 20	1292 - 1311	Cleavage	CACGAGTGAGAGAAGACAGT ::::::.::::::::::::: GTGCTCGCTCTCTTCTGTCA
mdm-MIR156h	gma-miR156q	TGACAGAAGAGAGTGAGCAC	KNOWN	MDP0000249364	4-coumarate--CoA ligase-like 1 E-value: 9e-91 more	1	13.623	1 - 20	3014 - 3033	Cleavage	CACGAGTGAGAGAAGACAGT :::::: ::::::::::::: GTGCTCTCTCTCTTCTGTCA
mdm-MIR156h	gma-miR156q	TGACAGAAGAGAGTGAGCAC	KNOWN	MDP0000263766	Squamosa promoter-binding-like protein 13 E-value: 8e-57 more	1	23.294	1 - 20	1256 - 1275	Cleavage	CACGAGTGAGAGAAGACAGT :::::: ::::::::::::: GTGCTCTCTCTCTTCTGTCA
mdm-MIR156h	gma-miR156q	TGACAGAAGAGAGTGAGCAC	KNOWN	MDP0000119458	Squamosa promoter-binding-like protein 6 E-value: 5e-37 more	1	16.916	1 - 20	1328 - 1347	Cleavage	CACGAGTGAGAGAAGACAGT :::::: ::::::::::::: GTGCTCTCTCTCTTCTGTCA
mdm-MIR156h	gma-miR156q	TGACAGAAGAGAGTGAGCAC	KNOWN	MDP0000155354	Squamosa promoter-binding-like protein 12 E-value: 8e-63 more	1	14.581	1 - 20	1436 - 1455	Cleavage	CACGAGTGAGAGAAGACAGT :::::: ::::::::::::: GTGCTCTCTCTCTTCTGTCA
mdm-MIR156h	gma-miR156q	TGACAGAAGAGAGTGAGCAC	KNOWN	MDP0000193702	Squamosa promoter-binding-like protein 6 E-value: 5e-37 more	1	16.916	1 - 20	1328 - 1347	Cleavage	CACGAGTGAGAGAAGACAGT :::::: ::::::::::::: GTGCTCTCTCTCTTCTGTCA
mdm-MIR156h	gma-miR156q	TGACAGAAGAGAGTGAGCAC	KNOWN	MDP0000171877	Squamosa promoter-binding-like protein 6 E-value: 2e-31 more	1	20.376	1 - 20	1376 - 1395	Cleavage	CACGAGTGAGAGAAGACAGT :::::: ::::::::::::: GTGCTCTCTCTCTTCTGTCA
mdm-MIR156h	gma-miR156q	TGACAGAAGAGAGTGAGCAC	KNOWN	MDP0000778465	Squamosa promoter-binding-like protein 6 E-value: 1e-38 more	1	12.258	1 - 20	1379 - 1398	Cleavage	CACGAGTGAGAGAAGACAGT :::::: ::::::::::::: GTGCTCTCTCTCTTCTGTCA
mdm-MIR156h	gma-miR156q	TGACAGAAGAGAGTGAGCAC	KNOWN	MDP0000146640	Squamosa promoter-binding-like protein 6 E-value: 1e-38 more	1	12.258	1 - 20	1379 - 1398	Cleavage	CACGAGTGAGAGAAGACAGT :::::: ::::::::::::: GTGCTCTCTCTCTTCTGTCA
mdm-MIR156h	gma-miR156q	TGACAGAAGAGAGTGAGCAC	KNOWN	MDP0000246046	Squamosa promoter-binding-like protein 6 E-value: 5e-31 more	1	20.376	1 - 20	1322 - 1341	Cleavage	CACGAGTGAGAGAAGACAGT :::::: ::::::::::::: GTGCTCTCTCTCTTCTGTCA
mdm-MIR156h	gma-miR156q	TGACAGAAGAGAGTGAGCAC	KNOWN	MDP0000322647	Squamosa promoter-binding-like protein 14 E-value: 5e-30 more	1	21.655	1 - 20	1307 - 1326	Cleavage	CACGAGTGAGAGAAGACAGT :::::: ::::::::::::: GTGCTCTCTCTCTTCTGTCA
mdm-MIR156h	gma-miR156q	TGACAGAAGAGAGTGAGCAC	KNOWN	MDP0000262141	Squamosa promoter-binding-like protein 7 E-value: 1e-34 more	1	15.959	1 - 20	1145 - 1164	Cleavage	CACGAGTGAGAGAAGACAGT :::::: ::::::::::::: GTGCTCTCTCTCTTCTGTCA
mdm-MIR156h	gma-miR156q	TGACAGAAGAGAGTGAGCAC	KNOWN	MDP0000297978	Squamosa promoter-binding-like protein 14 E-value: 4e-63 more	1	16.576	1 - 20	1094 - 1113	Cleavage	CACGAGTGAGAGAAGACAGT :::::: ::::::::::::: GTGCTCTCTCTCTTCTGTCA
mdm-MIR156h	gma-miR156q	TGACAGAAGAGAGTGAGCAC	KNOWN	MDP0000176265	Squamosa promoter-binding-like protein 16 E-value: 6e-40 more	1	24.672	1 - 20	1004 - 1023	Cleavage	CACGAGTGAGAGAAGACAGT :::::: ::::::::::::: GTGCTCTCTCTCTTCTGTCA
mdm-MIR156h	gma-miR156q	TGACAGAAGAGAGTGAGCAC	KNOWN	MDP0000156994	no hits with E-value < 1e-10	2	20.688	1 - 20	907 - 926	Cleavage	CACGAGTGAGAGAAGACAGT ::::: ::::::::::::: ATGCTCCCTCTCTTCTGTCA
mdm-MIR156h	gma-miR156q	TGACAGAAGAGAGTGAGCAC	KNOWN	MDP0000861601	no hits with E-value < 1e-10	2	20.688	1 - 20	907 - 926	Cleavage	CACGAGTGAGAGAAGACAGT ::::: ::::::::::::: ATGCTCCCTCTCTTCTGTCA
mdm-MIR156h	gma-miR156q	TGACAGAAGAGAGTGAGCAC	KNOWN	MDP0000158607	no hits with E-value < 1e-10	2	14.433	1 - 20	900 - 919	Cleavage	CACGAGTGAGAGAAGACAGT ::::: ::::::::::::: ATGCTCTCTCTCTTCTGTCA
mdm-MIR156h	gma-miR156q	TGACAGAAGAGAGTGAGCAC	KNOWN	MDP0000865739	no hits with E-value < 1e-10	2	14.406	1 - 20	882 - 901	Cleavage	CACGAGTGAGAGAAGACAGT ::::: ::::::::::::: ATGCTCCCTCTCTTCTGTCA
mdm-MIR156h	gma-miR156q	TGACAGAAGAGAGTGAGCAC	KNOWN	MDP0000255162	no hits with E-value < 1e-10	2	8.973	1 - 20	807 - 826	Cleavage	CACGAGTGAGAGAAGACAGT ::::: ::::::::::::: ATGCTCCCTCTCTTCTGTCA
mdm-MIR156h	gma-miR156q	TGACAGAAGAGAGTGAGCAC	KNOWN	MDP0000538106	no hits with E-value < 1e-10	2	9.391	1 - 20	807 - 826	Cleavage	CACGAGTGAGAGAAGACAGT ::::: ::::::::::::: ATGCTCCCTCTCTTCTGTCA
mdm-MIR156h	gma-miR156q	TGACAGAAGAGAGTGAGCAC	KNOWN	MDP0000209716	LRR receptor-like serine/threonine-protein kinase GSO2 E-value: 2e-64 more	2.5	10.737	1 - 20	864 - 883	Cleavage	CACGAGTGAGAGAAGACAGT : ::::.::.::::.::::: GAGCTCGCTTTCTTTTGTCA
mdm-MIR156h	gma-miR156q	TGACAGAAGAGAGTGAGCAC	KNOWN	MDP0000142582	Squamosa promoter-binding-like protein 13 E-value: 2e-36 more	2	18.621	1 - 20	1082 - 1101	Translation	CACGAGTGAGAGAAGACAGT :::::: :: :::::::::: GTGCTCTCTATCTTCTGTCA

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name

mature homolog

mature

mature status

target

best UniProt hit

expectation

UPE

miRNA start-end

target start-end

inhibition

miRNA:target duplex