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Malus Domestica - miRNA targets Filter by mature miRNA sequence or return to all        Help


name

mature homolog

mature

mature status

target

best UniProt hit

expectation

UPE

miRNA start-end

target start-end

inhibition

miRNA:target duplex
mdm-MIR482d mdm-miR482b TCTTTCCTATCCCTCCCATTCC KNOWN TC77243no hits with E-value < 1e-10 2.5 22.772 1 - 22 695 - 716 Translation 
CCTTACCCTCCCTATCCTTTCT
::.:::::::: ::.::.::::
GGGATGGGAGGAATGGGGAAGA
mdm-MIR482d mdm-miR482b TCTTTCCTATCCCTCCCATTCC KNOWN EB147074no hits with E-value < 1e-10 3 17.603 1 - 22 206 - 227 Cleavage 
CCTTACCCTCCCTATCCTTTCT
::::::: ::::.::::::: :
GGAATGGAAGGGGTAGGAAATA
mdm-MIR482d mdm-miR482b TCTTTCCTATCCCTCCCATTCC KNOWN TC71659no hits with E-value < 1e-10 3 17.996 1 - 22 413 - 434 Cleavage 
CCTTACCCTCCCTATCCTTTCT
:::::::  :::::.::::.::
GGAATGGATGGGATGGGAAGGA
mdm-MIR482d mdm-miR482b TCTTTCCTATCCCTCCCATTCC KNOWN TC91144no hits with E-value < 1e-10 3 20.031 1 - 22 103 - 124 Cleavage 
CCTTACCCTCCCTATCCTTTCT
:::: :::::::.: ::.::::
GGAAAGGGAGGGGTCGGGAAGA
mdm-MIR482d mdm-miR482b TCTTTCCTATCCCTCCCATTCC KNOWN TC85632no hits with E-value < 1e-10 3 13.861 1 - 22 723 - 744 Cleavage 
CCTTACCCTCCCTATCCTTTCT
:::::::  :::::.::::.::
GGAATGGATGGGATGGGAAGGA
mdm-MIR482d mdm-miR482b TCTTTCCTATCCCTCCCATTCC KNOWN CV129322no hits with E-value < 1e-10 3 20.317 1 - 22 385 - 406 Translation 
CCTTACCCTCCCTATCCTTTCT
:: :::::::: :: :::::::
GGTATGGGAGGTATTGGAAAGA
mdm-MIR482d mdm-miR482b TCTTTCCTATCCCTCCCATTCC KNOWN MDP0000290477no hits with E-value < 1e-10 2 9.818 1 - 22 176 - 197 Cleavage 
CCTTACCCTCCCTATCCTTTCT
::.:::::::::::::::: ::
GGGATGGGAGGGATAGGAATGA
mdm-MIR482d mdm-miR482b TCTTTCCTATCCCTCCCATTCC KNOWN MDP0000177288TMV resistance protein N
E-value: 2e-58
more		 1.5 11.555 1 - 22 1186 - 1207 Cleavage 
CCTTACCCTCCCTATCCTTTCT
::.:: ::::::::::::::::
GGGATCGGAGGGATAGGAAAGA
mdm-MIR482d mdm-miR482b TCTTTCCTATCCCTCCCATTCC KNOWN MDP0000217718Putative disease resistance protein RGA3
E-value: 1e-29
more		 2 21.879 1 - 22 622 - 643 Translation 
CCTTACCCTCCCTATCCTTTCT
::.:::::::: ::.:::::::
GGGATGGGAGGTATGGGAAAGA
mdm-MIR482d mdm-miR482b TCTTTCCTATCCCTCCCATTCC KNOWN MDP0000266458Putative disease resistance protein RGA3
E-value: 6e-57
more		 2 21.815 1 - 22 106 - 127 Translation 
CCTTACCCTCCCTATCCTTTCT
::.:::::::: ::.:::::::
GGGATGGGAGGTATGGGAAAGA
mdm-MIR482d mdm-miR482b TCTTTCCTATCCCTCCCATTCC KNOWN MDP0000275398Putative disease resistance protein RGA3
E-value: 1e-91
more		 2 19.782 1 - 22 502 - 523 Translation 
CCTTACCCTCCCTATCCTTTCT
::.:::::::: ::.:::::::
GGGATGGGAGGTATGGGAAAGA
mdm-MIR482d mdm-miR482b TCTTTCCTATCCCTCCCATTCC KNOWN MDP0000308801Putative disease resistance protein At1g50180
E-value: 9e-100
more		 2 18.347 1 - 22 670 - 691 Translation 
CCTTACCCTCCCTATCCTTTCT
::::::::.:: .:::::::::
GGAATGGGGGGTGTAGGAAAGA
mdm-MIR482d mdm-miR482b TCTTTCCTATCCCTCCCATTCC KNOWN MDP0000273547Putative disease resistance protein RGA3
E-value: 1e-52
more		 2 22.85 1 - 22 937 - 958 Translation 
CCTTACCCTCCCTATCCTTTCT
::.:::::::: ::.:::::::
GGGATGGGAGGAATGGGAAAGA
mdm-MIR482d mdm-miR482b TCTTTCCTATCCCTCCCATTCC KNOWN MDP0000211316Putative disease resistance protein RGA3
E-value: 1e-110
more		 2 21.804 1 - 22 622 - 643 Translation 
CCTTACCCTCCCTATCCTTTCT
::.:::::::: ::.:::::::
GGGATGGGAGGTATGGGAAAGA
mdm-MIR482d mdm-miR482b TCTTTCCTATCCCTCCCATTCC KNOWN MDP0000906293Disease resistance protein RPM1
E-value: 1e-130
more		 2 20.085 1 - 22 880 - 901 Translation 
CCTTACCCTCCCTATCCTTTCT
::::::::::: ::.::.::::
GGAATGGGAGGAATGGGGAAGA
mdm-MIR482d mdm-miR482b TCTTTCCTATCCCTCCCATTCC KNOWN MDP0000811129Disease resistance protein RPM1
E-value: 1e-130
more		 2 20.085 1 - 22 880 - 901 Translation 
CCTTACCCTCCCTATCCTTTCT
::::::::::: ::.::.::::
GGAATGGGAGGAATGGGGAAGA
mdm-MIR482d mdm-miR482b TCTTTCCTATCCCTCCCATTCC KNOWN MDP0000299465Putative disease resistance protein RGA3
E-value: 1e-111
more		 2 21.03 1 - 22 922 - 943 Translation 
CCTTACCCTCCCTATCCTTTCT
::.:::::::: ::.:::::::
GGGATGGGAGGTATGGGAAAGA
mdm-MIR482d mdm-miR482b TCTTTCCTATCCCTCCCATTCC KNOWN MDP0000160232Putative disease resistance protein RGA3
E-value: 4e-105
more		 2 24.335 1 - 22 934 - 955 Translation 
CCTTACCCTCCCTATCCTTTCT
::.:::::::: ::.:::::::
GGGATGGGAGGAATGGGAAAGA
mdm-MIR482d mdm-miR482b TCTTTCCTATCCCTCCCATTCC KNOWN MDP0000157081Putative disease resistance protein RGA4
E-value: 5e-39
more		 2.5 22.466 1 - 22 916 - 937 Translation 
CCTTACCCTCCCTATCCTTTCT
::.:::::::: ::.::.::::
GGGATGGGAGGAATGGGGAAGA
mdm-MIR482d mdm-miR482b TCTTTCCTATCCCTCCCATTCC KNOWN MDP0000569038Putative disease resistance protein RGA3
E-value: 6e-52
more		 2.5 23.437 1 - 22 853 - 874 Translation 
CCTTACCCTCCCTATCCTTTCT
::.:::::::: ::.:: ::::
GGGATGGGAGGAATGGGNAAGA
mdm-MIR482d mdm-miR482b TCTTTCCTATCCCTCCCATTCC KNOWN MDP0000166800Putative disease resistance protein RGA3
E-value: 1e-69
more		 2.5 24.389 1 - 22 946 - 967 Translation 
CCTTACCCTCCCTATCCTTTCT
::.:::::::: ::.::.::::
GGGATGGGAGGAATGGGGAAGA
mdm-MIR482d mdm-miR482b TCTTTCCTATCCCTCCCATTCC KNOWN MDP0000267389Disease resistance protein RGA2
E-value: 1e-31
more		 2.5 24.701 1 - 22 1070 - 1091 Translation 
CCTTACCCTCCCTATCCTTTCT
::.:::::::: ::.: :::::
GGGATGGGAGGTATGGNAAAGA

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KNOWN and CONSERVED: 0 (0)
CONSERVED: 0 (0)
NOVEL: 0 (0)