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Malus Domestica - miRNA targets Filter by mature miRNA sequence or return to all        Help


name

mature homolog

mature

mature status

target

best UniProt hit

expectation

UPE

miRNA start-end

target start-end

inhibition

miRNA:target duplex
mdm-MIR482c mdm-miR482c TCTTTCCTAACCCTCCCATTCC KNOWN TC67590no hits with E-value < 1e-10 3 13.761 1 - 22 581 - 602 Cleavage 
CCTTACCCTCCCAATCCTTTCT
:::::::  :::::.::::::.
GGAATGGATGGGTTGGGAAAGG
mdm-MIR482c mdm-miR482c TCTTTCCTAACCCTCCCATTCC KNOWN MDP0000290477no hits with E-value < 1e-10 3 9.818 1 - 22 176 - 197 Translation 
CCTTACCCTCCCAATCCTTTCT
::.::::::::: :::::: ::
GGGATGGGAGGGATAGGAATGA
mdm-MIR482c mdm-miR482c TCTTTCCTAACCCTCCCATTCC KNOWN MDP0000308801Putative disease resistance protein At1g50180
E-value: 9e-100
more		 2.5 18.347 1 - 22 670 - 691 Translation 
CCTTACCCTCCCAATCCTTTCT
::::::::.::  :::::::::
GGAATGGGGGGTGTAGGAAAGA
mdm-MIR482c mdm-miR482c TCTTTCCTAACCCTCCCATTCC KNOWN MDP0000197733Putative disease resistance protein At1g50180
E-value: 7e-146
more		 3 20.896 1 - 22 868 - 889 Translation 
CCTTACCCTCCCAATCCTTTCT
::.::::: :: ::.:::::::
GGGATGGGNGGTTTGGGAAAGA
mdm-MIR482c mdm-miR482c TCTTTCCTAACCCTCCCATTCC KNOWN MDP0000177288TMV resistance protein N
E-value: 2e-58
more		 2.5 11.555 1 - 22 1186 - 1207 Translation 
CCTTACCCTCCCAATCCTTTCT
::.:: :::::: :::::::::
GGGATCGGAGGGATAGGAAAGA
mdm-MIR482c mdm-miR482c TCTTTCCTAACCCTCCCATTCC KNOWN MDP0000300921Putative disease resistance protein At1g50180
E-value: 3e-156
more		 3 21.572 1 - 22 796 - 817 Translation 
CCTTACCCTCCCAATCCTTTCT
::.::::: :: ::.::.::::
GGGATGGGNGGTTTGGGGAAGA
mdm-MIR482c mdm-miR482c TCTTTCCTAACCCTCCCATTCC KNOWN MDP0000265485Putative disease resistance protein At1g50180
E-value: 3e-156
more		 3 21.572 1 - 22 796 - 817 Translation 
CCTTACCCTCCCAATCCTTTCT
::.::::: :: ::.::.::::
GGGATGGGNGGTTTGGGGAAGA
mdm-MIR482c mdm-miR482c TCTTTCCTAACCCTCCCATTCC KNOWN MDP0000217718Putative disease resistance protein RGA3
E-value: 1e-29
more		 3 21.879 1 - 22 622 - 643 Translation 
CCTTACCCTCCCAATCCTTTCT
::.::::::::  :.:::::::
GGGATGGGAGGTATGGGAAAGA
mdm-MIR482c mdm-miR482c TCTTTCCTAACCCTCCCATTCC KNOWN MDP0000266458Putative disease resistance protein RGA3
E-value: 6e-57
more		 3 21.815 1 - 22 106 - 127 Translation 
CCTTACCCTCCCAATCCTTTCT
::.::::::::  :.:::::::
GGGATGGGAGGTATGGGAAAGA
mdm-MIR482c mdm-miR482c TCTTTCCTAACCCTCCCATTCC KNOWN MDP0000275398Putative disease resistance protein RGA3
E-value: 1e-91
more		 3 19.782 1 - 22 502 - 523 Translation 
CCTTACCCTCCCAATCCTTTCT
::.::::::::  :.:::::::
GGGATGGGAGGTATGGGAAAGA
mdm-MIR482c mdm-miR482c TCTTTCCTAACCCTCCCATTCC KNOWN MDP0000273547Putative disease resistance protein RGA3
E-value: 1e-52
more		 3 22.85 1 - 22 937 - 958 Translation 
CCTTACCCTCCCAATCCTTTCT
::.::::::::  :.:::::::
GGGATGGGAGGAATGGGAAAGA
mdm-MIR482c mdm-miR482c TCTTTCCTAACCCTCCCATTCC KNOWN MDP0000211316Putative disease resistance protein RGA3
E-value: 1e-110
more		 3 21.804 1 - 22 622 - 643 Translation 
CCTTACCCTCCCAATCCTTTCT
::.::::::::  :.:::::::
GGGATGGGAGGTATGGGAAAGA
mdm-MIR482c mdm-miR482c TCTTTCCTAACCCTCCCATTCC KNOWN MDP0000811129Disease resistance protein RPM1
E-value: 1e-130
more		 3 20.085 1 - 22 880 - 901 Translation 
CCTTACCCTCCCAATCCTTTCT
:::::::::::  :.::.::::
GGAATGGGAGGAATGGGGAAGA
mdm-MIR482c mdm-miR482c TCTTTCCTAACCCTCCCATTCC KNOWN MDP0000906293Disease resistance protein RPM1
E-value: 1e-130
more		 3 20.085 1 - 22 880 - 901 Translation 
CCTTACCCTCCCAATCCTTTCT
:::::::::::  :.::.::::
GGAATGGGAGGAATGGGGAAGA

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KNOWN: 1 (14)
KNOWN and CONSERVED: 0 (0)
CONSERVED: 0 (0)
NOVEL: 0 (0)