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Malus Domestica - miRNA targets Filter by mature miRNA sequence or return to all        Help


name

mature homolog

mature

mature status

target

best UniProt hit

expectation

UPE

miRNA start-end

target start-end

inhibition

miRNA:target duplex
mdm-MIR32N vvi-miR828a TCTTGCTCAAATGAGTATTCCA CONSERVED GO499709no hits with E-value < 1e-10 1.5 10.358 1 - 22 148 - 169 Cleavage 
ACCTTATGAGTAAACTCGTTCT
::::. ::::::::::::::::
TGGAGCACTCATTTGAGCAAGA
mdm-MIR32N vvi-miR828a TCTTGCTCAAATGAGTATTCCA CONSERVED GO516625no hits with E-value < 1e-10 2.5 13.969 1 - 22 415 - 436 Cleavage 
ACCTTATGAGTAAACTCGTTCT
:::::: ::::::::::::: :
TGGAATTCTCATTTGAGCAAAA
mdm-MIR32N vvi-miR828a TCTTGCTCAAATGAGTATTCCA CONSERVED TC81701no hits with E-value < 1e-10 2 24.284 1 - 22 465 - 486 Cleavage 
ACCTTATGAGTAAACTCGTTCT
::::: : ::::::::::::::
TGGAACAGTCATTTGAGCAAGA
mdm-MIR32N vvi-miR828a TCTTGCTCAAATGAGTATTCCA CONSERVED TC73226no hits with E-value < 1e-10 2 22.898 1 - 22 588 - 609 Cleavage 
ACCTTATGAGTAAACTCGTTCT
::::: : ::::::::::::::
TGGAACAGTCATTTGAGCAAGA
mdm-MIR32N vvi-miR828a TCTTGCTCAAATGAGTATTCCA CONSERVED TC87190no hits with E-value < 1e-10 2.5 15.085 1 - 22 128 - 149 Cleavage 
ACCTTATGAGTAAACTCGTTCT
:: :. ::::::::::::::::
TGTAGCACTCATTTGAGCAAGA
mdm-MIR32N vvi-miR828a TCTTGCTCAAATGAGTATTCCA CONSERVED MDP0000133817Anthocyanin regulatory C1 protein
E-value: 1e-41
more		 1 12.709 1 - 22 625 - 646 Cleavage 
ACCTTATGAGTAAACTCGTTCT
:::::: :::::::::::::::
TGGAATTCTCATTTGAGCAAGA
mdm-MIR32N vvi-miR828a TCTTGCTCAAATGAGTATTCCA CONSERVED MDP0000143276Anthocyanin regulatory C1 protein
E-value: 1e-41
more		 1 12.016 1 - 22 625 - 646 Cleavage 
ACCTTATGAGTAAACTCGTTCT
:::::: :::::::::::::::
TGGAATTCTCATTTGAGCAAGA
mdm-MIR32N vvi-miR828a TCTTGCTCAAATGAGTATTCCA CONSERVED MDP0000124555Transcription factor WER
E-value: 4e-43
more		 1 12.824 1 - 22 667 - 688 Cleavage 
ACCTTATGAGTAAACTCGTTCT
:::::: :::::::::::::::
TGGAATTCTCATTTGAGCAAGA
mdm-MIR32N vvi-miR828a TCTTGCTCAAATGAGTATTCCA CONSERVED MDP0000578193Transcription factor WER
E-value: 2e-57
more		 1 20.96 1 - 22 610 - 631 Cleavage 
ACCTTATGAGTAAACTCGTTCT
::::: ::::::::::::::::
TGGAACACTCATTTGAGCAAGA
mdm-MIR32N vvi-miR828a TCTTGCTCAAATGAGTATTCCA CONSERVED MDP0000145557Serine/threonine-protein phosphatase 2A 65 kDa regulatory subuni
E-value: 0.0
more		 1.5 10.695 1 - 22 2641 - 2662 Cleavage 
ACCTTATGAGTAAACTCGTTCT
::::. ::::::::::::::::
TGGAGCACTCATTTGAGCAAGA
mdm-MIR32N vvi-miR828a TCTTGCTCAAATGAGTATTCCA CONSERVED MDP0000193637Transcription factor WER
E-value: 2e-48
more		 2 20.428 1 - 22 607 - 628 Cleavage 
ACCTTATGAGTAAACTCGTTCT
::::: . ::::::::::::::
TGGAANGGTCATTTGAGCAAGA
mdm-MIR32N vvi-miR828a TCTTGCTCAAATGAGTATTCCA CONSERVED MDP0000642761Transcription factor WER
E-value: 3e-50
more		 2 19.112 1 - 22 607 - 628 Cleavage 
ACCTTATGAGTAAACTCGTTCT
::::: . ::::::::::::::
TGGAANGGTCATTTGAGCAAGA
mdm-MIR32N vvi-miR828a TCTTGCTCAAATGAGTATTCCA CONSERVED MDP0000226215Anthocyanin regulatory C1 protein
E-value: 8e-43
more		 2.5 11.965 1 - 22 625 - 646 Cleavage 
ACCTTATGAGTAAACTCGTTCT
:::::: ::::::::::::: :
TGGAATTCTCATTTGAGCAAAA
mdm-MIR32N vvi-miR828a TCTTGCTCAAATGAGTATTCCA CONSERVED MDP0000253904Anthocyanin regulatory C1 protein
E-value: 5e-43
more		 2.5 11.965 1 - 22 625 - 646 Cleavage 
ACCTTATGAGTAAACTCGTTCT
:::::: ::::::::::::: :
TGGAATTCTCATTTGAGCAAAA
mdm-MIR32N vvi-miR828a TCTTGCTCAAATGAGTATTCCA CONSERVED MDP0000931057Anthocyanin regulatory C1 protein
E-value: 1e-42
more		 2.5 11.142 1 - 22 667 - 688 Cleavage 
ACCTTATGAGTAAACTCGTTCT
:::::: ::::::::::::: :
TGGAATTCTCATTTGAGCAAAA
mdm-MIR32N vvi-miR828a TCTTGCTCAAATGAGTATTCCA CONSERVED MDP0000650225Transcription factor WER
E-value: 2e-52
more		 2 22.613 1 - 22 607 - 628 Cleavage 
ACCTTATGAGTAAACTCGTTCT
::::: : ::::::::::::::
TGGAACAGTCATTTGAGCAAGA
mdm-MIR32N vvi-miR828a TCTTGCTCAAATGAGTATTCCA CONSERVED MDP0000167314Transcription factor MYB82
E-value: 2e-52
more		 2.5 16.858 1 - 22 643 - 664 Cleavage 
ACCTTATGAGTAAACTCGTTCT
:::::::: ::::::: :::::
TGGAATACCCATTTGAACAAGA
mdm-MIR32N vvi-miR828a TCTTGCTCAAATGAGTATTCCA CONSERVED MDP0000264051Transcription factor MYB82
E-value: 4e-52
more		 2.5 18.272 1 - 22 640 - 661 Cleavage 
ACCTTATGAGTAAACTCGTTCT
:::::::: ::::::: :::::
TGGAATACCCATTTGAACAAGA
mdm-MIR32N vvi-miR828a TCTTGCTCAAATGAGTATTCCA CONSERVED MDP0000581761Transcription repressor MYB6
E-value: 2e-21
more		 2.5 13.653 1 - 22 148 - 169 Translation 
ACCTTATGAGTAAACTCGTTCT
:::::::::::: : ::::.::
TGGAATACTCATCTCAGCAGGA
mdm-MIR32N vvi-miR828a TCTTGCTCAAATGAGTATTCCA CONSERVED MDP0000899251no hits with E-value < 1e-10 2.5 13.653 1 - 22 619 - 640 Translation 
ACCTTATGAGTAAACTCGTTCT
:::::::::::: : ::::.::
TGGAATACTCATCTCAGCAGGA
mdm-MIR32N vvi-miR828a TCTTGCTCAAATGAGTATTCCA CONSERVED MDP0000164048Transcription factor WER
E-value: 1e-49
more		 3 19.963 1 - 22 607 - 628 Cleavage 
ACCTTATGAGTAAACTCGTTCT
::::: .::::::::::::: :
TGGAACGCTCATTTGAGCAAAA
mdm-MIR32N vvi-miR828a TCTTGCTCAAATGAGTATTCCA CONSERVED MDP0000268980Lysine-specific histone demethylase 1 homolog 1
E-value: 1e-38
more		 2.5 11.815 1 - 22 1273 - 1294 Translation 
ACCTTATGAGTAAACTCGTTCT
:::::: :::: :::::::.::
TGGAATTCTCACTTGAGCAGGA
mdm-MIR32N vvi-miR828a TCTTGCTCAAATGAGTATTCCA CONSERVED MDP0000317209Anthocyanin regulatory C1 protein
E-value: 5e-45
more		 3 13.22 1 - 22 622 - 643 Cleavage 
ACCTTATGAGTAAACTCGTTCT
:::::::.  .:::::::::::
TGGAATATCAGTTTGAGCAAGA
mdm-MIR32N vvi-miR828a TCTTGCTCAAATGAGTATTCCA CONSERVED MDP0000475808Transcription factor TT2
E-value: 2e-30
more		 3 13.011 1 - 22 292 - 313 Cleavage 
ACCTTATGAGTAAACTCGTTCT
:::::::.  .:::::::::::
TGGAATATCAGTTTGAGCAAGA

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KNOWN: 0 (0)
KNOWN and CONSERVED: 0 (0)
CONSERVED: 1 (24)
NOVEL: 0 (0)