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Malus Domestica - miRNA targets Filter by mature miRNA sequence or return to all        Help


name

mature homolog

mature

mature status

target

best UniProt hit

expectation

UPE

miRNA start-end

target start-end

inhibition

miRNA:target duplex
mdm-MIR45N zma-miR166h-3p TCGGACCAGGCTTCATTCCCC CONSERVED TC66364no hits with E-value < 1e-10 2.5 24.847 1 - 21 724 - 744 Cleavage 
CCCCTTACTTCGGACCAGGCT
  ::::::::::::::::::.
CTGGAATGAAGCCTGGTCCGG
mdm-MIR45N zma-miR166h-3p TCGGACCAGGCTTCATTCCCC CONSERVED EB124559no hits with E-value < 1e-10 3 22.319 1 - 21 383 - 403 Cleavage 
CCCCTTACTTCGGACCAGGCT
  ::.:::::::::::::::.
TTGGGATGAAGCCTGGTCCGG
mdm-MIR45N zma-miR166h-3p TCGGACCAGGCTTCATTCCCC CONSERVED TC70667no hits with E-value < 1e-10 3 22.128 1 - 21 72 - 92 Cleavage 
CCCCTTACTTCGGACCAGGCT
  ::.:::::::::::::::.
CTGGGATGAAGCCTGGTCCGG
mdm-MIR45N zma-miR166h-3p TCGGACCAGGCTTCATTCCCC CONSERVED TC75601no hits with E-value < 1e-10 3 23.006 1 - 21 484 - 504 Cleavage 
CCCCTTACTTCGGACCAGGCT
  ::.:::::::::::::::.
CTGGGATGAAGCCTGGTCCGG
mdm-MIR45N zma-miR166h-3p TCGGACCAGGCTTCATTCCCC CONSERVED MDP0000251484Homeobox-leucine zipper protein ATHB-15
E-value: 0.0
more		 2.5 24.827 1 - 21 905 - 925 Cleavage 
CCCCTTACTTCGGACCAGGCT
  ::::::::::::::::::.
CTGGAATGAAGCCTGGTCCGG
mdm-MIR45N zma-miR166h-3p TCGGACCAGGCTTCATTCCCC CONSERVED MDP0000313059Homeobox-leucine zipper protein ATHB-15
E-value: 0.0
more		 2.5 24.847 1 - 21 851 - 871 Cleavage 
CCCCTTACTTCGGACCAGGCT
  ::::::::::::::::::.
CTGGAATGAAGCCTGGTCCGG
mdm-MIR45N zma-miR166h-3p TCGGACCAGGCTTCATTCCCC CONSERVED MDP0000426630Homeobox-leucine zipper protein REVOLUTA
E-value: 0.0
more		 3 23.521 1 - 21 860 - 880 Cleavage 
CCCCTTACTTCGGACCAGGCT
  ::.:::::::::::::::.
CTGGGATGAAGCCTGGTCCGG
mdm-MIR45N zma-miR166h-3p TCGGACCAGGCTTCATTCCCC CONSERVED MDP0000005879Homeobox-leucine zipper protein ATHB-8
E-value: 0.0
more		 3 24.209 1 - 21 830 - 850 Cleavage 
CCCCTTACTTCGGACCAGGCT
  ::.:::::::::::::::.
CTGGGATGAAGCCTGGTCCGG
mdm-MIR45N zma-miR166h-3p TCGGACCAGGCTTCATTCCCC CONSERVED MDP0000242861Homeobox-leucine zipper protein REVOLUTA
E-value: 0.0
more		 3 21.347 1 - 21 860 - 880 Cleavage 
CCCCTTACTTCGGACCAGGCT
  ::.:::::::::::::::.
CTGGGATGAAGCCTGGTCCGG
mdm-MIR45N zma-miR166h-3p TCGGACCAGGCTTCATTCCCC CONSERVED MDP0000236500Homeobox-leucine zipper protein REVOLUTA
E-value: 0.0
more		 3 21.347 1 - 21 860 - 880 Cleavage 
CCCCTTACTTCGGACCAGGCT
  ::.:::::::::::::::.
CTGGGATGAAGCCTGGTCCGG
mdm-MIR45N zma-miR166h-3p TCGGACCAGGCTTCATTCCCC CONSERVED MDP0000050082Homeobox-leucine zipper protein HOX32
E-value: 0.0
more		 3 22.319 1 - 21 887 - 907 Cleavage 
CCCCTTACTTCGGACCAGGCT
  ::.:::::::::::::::.
TTGGGATGAAGCCTGGTCCGG
mdm-MIR45N zma-miR166h-3p TCGGACCAGGCTTCATTCCCC CONSERVED MDP0000943529Homeobox-leucine zipper protein HOX32
E-value: 0.0
more		 3 23.442 1 - 21 887 - 907 Cleavage 
CCCCTTACTTCGGACCAGGCT
  ::.:::::::::::::::.
TTGGGATGAAGCCTGGTCCGG
mdm-MIR45N zma-miR166h-3p TCGGACCAGGCTTCATTCCCC CONSERVED MDP0000126553Homeobox-leucine zipper protein ATHB-8
E-value: 0.0
more		 3 22.498 1 - 21 866 - 886 Cleavage 
CCCCTTACTTCGGACCAGGCT
  ::.:::::::::::::::.
CTGGGATGAAGCCTGGTCCGG

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KNOWN: 0 (0)
KNOWN and CONSERVED: 0 (0)
CONSERVED: 1 (13)
NOVEL: 0 (0)