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Malus Domestica - miRNA targets Filter by mature miRNA sequence or return to all        Help


name

mature homolog

mature

mature status

target

best UniProt hit

expectation

UPE

miRNA start-end

target start-end

inhibition

miRNA:target duplex
mdm-MIR2111a None TCCTTGGGATGCAGATTACCT KNOWN CV794399no hits with E-value < 1e-10 2.5 14.832 1 - 21 333 - 353 Cleavage 
TCCATTAGACGTAGGGTTCCT
:: :.:::::::::.:.::::
AGCTGATCTGCATCTCGAGGA
mdm-MIR2111a None TCCTTGGGATGCAGATTACCT KNOWN TC74229no hits with E-value < 1e-10 2.5 18.03 1 - 21 749 - 769 Cleavage 
TCCATTAGACGTAGGGTTCCT
: ::::::::.::.::.::::
ATGTAATCTGTATTCCGAGGA
mdm-MIR2111a None TCCTTGGGATGCAGATTACCT KNOWN MDP0000609416Probable LRR receptor-like serine/threonine-protein kinase At3g4
E-value: 0.0
more		 2.5 14.832 1 - 21 1650 - 1670 Cleavage 
TCCATTAGACGTAGGGTTCCT
:: :.:::::::::.:.::::
AGCTGATCTGCATCTCGAGGA
mdm-MIR2111a None TCCTTGGGATGCAGATTACCT KNOWN MDP0000247441DNA gyrase subunit A, chloroplastic/mitochondrial
E-value: 8e-70
more		 3 16.962 1 - 21 1113 - 1133 Cleavage 
TCCATTAGACGTAGGGTTCCT
:: :::::: ::::.:.::::
AGCTAATCTTCATCTCGAGGA
mdm-MIR2111a None TCCTTGGGATGCAGATTACCT KNOWN MDP0000213980Phosphatidylinositol N-acetylglucosaminyltransferase subunit Q
E-value: 2e-22
more		 3 15.141 1 - 21 1187 - 1207 Cleavage 
TCCATTAGACGTAGGGTTCCT
::::: :: ::::..::::::
AGGTATTCAGCATTTCAAGGA
mdm-MIR2111a None TCCTTGGGATGCAGATTACCT KNOWN MDP0000256805no hits with E-value < 1e-10 3 23.729 1 - 21 687 - 707 Translation 
TCCATTAGACGTAGGGTTCCT
::::. :::: :::::.::::
AGGTGTTCTGGATCCCGAGGA
mdm-MIR2111a None TCCTTGGGATGCAGATTACCT KNOWN MDP0000293286AP3-complex subunit beta-A
E-value: 0.0
more		 2.5 19.258 1 - 21 1965 - 1984 Cleavage 
TCCATTAGACGTAGGGTTCCT
::::.:::: :::::::::::
AGGTGATCTNCATCCCAAGGA
mdm-MIR2111a None TCCTTGGGATGCAGATTACCT KNOWN MDP0000167080Valine--tRNA ligase
E-value: 0.0
more		 3 24.99 1 - 21 2568 - 2588 Translation 
TCCATTAGACGTAGGGTTCCT
.:: :::.:: ::::::::::
GGGAAATTTGGATCCCAAGGA
mdm-MIR2111a None TCCTTGGGATGCAGATTACCT KNOWN MDP0000284129AP3-complex subunit beta-A
E-value: 0.0
more		 2.5 19.796 1 - 21 2112 - 2131 Cleavage 
TCCATTAGACGTAGGGTTCCT
::::.:::: :::::::::::
AGGTGATCTNCATCCCAAGGA

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KNOWN: 1 (9)
KNOWN and CONSERVED: 0 (0)
CONSERVED: 0 (0)
NOVEL: 0 (0)