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Malus Domestica - miRNA targets Filter by mature miRNA sequence or return to all        Help


name

mature homolog

mature

mature status

target

best UniProt hit

expectation

UPE

miRNA start-end

target start-end

inhibition

miRNA:target duplex
mdm-MIR122N None TATGGTTAAGAAACAAGCAGA NOVEL TC77342no hits with E-value < 1e-10 2.5 12.241 1 - 21 1411 - 1431 Cleavage 
AGACGAACAAAGAATTGGTAT
::::.::::::::::: :::.
TCTGTTTGTTTCTTAAACATG
mdm-MIR122N None TATGGTTAAGAAACAAGCAGA NOVEL TC79377no hits with E-value < 1e-10 3 13.912 1 - 21 264 - 284 Cleavage 
AGACGAACAAAGAATTGGTAT
::::::: ::::::::.:: :
TCTGCTTTTTTCTTAATCAGA
mdm-MIR122N None TATGGTTAAGAAACAAGCAGA NOVEL TC63892no hits with E-value < 1e-10 3 10.155 1 - 21 582 - 602 Cleavage 
AGACGAACAAAGAATTGGTAT
:.:::::  ::.:::::::::
TTTGCTTAATTTTTAACCATA
mdm-MIR122N None TATGGTTAAGAAACAAGCAGA NOVEL MDP0000623220no hits with E-value < 1e-10 2.5 12.117 1 - 21 1671 - 1691 Cleavage 
AGACGAACAAAGAATTGGTAT
::::.::::::::::: :::.
TCTGTTTGTTTCTTAAACATG
mdm-MIR122N None TATGGTTAAGAAACAAGCAGA NOVEL MDP0000127763Zinc finger protein 346
E-value: 3e-11
more		 2 16.006 1 - 21 1639 - 1659 Cleavage 
AGACGAACAAAGAATTGGTAT
:.::::: ::::::.::::::
TTTGCTTTTTTCTTGACCATA
mdm-MIR122N None TATGGTTAAGAAACAAGCAGA NOVEL MDP0000230429no hits with E-value < 1e-10 3 13.592 1 - 21 1752 - 1772 Translation 
AGACGAACAAAGAATTGGTAT
 ::::::::::. ::.:::::
CCTGCTTGTTTTGTAGCCATA
mdm-MIR122N None TATGGTTAAGAAACAAGCAGA NOVEL MDP0000181608no hits with E-value < 1e-10 3 14.259 1 - 21 66 - 86 Translation 
AGACGAACAAAGAATTGGTAT
:.::.:::::: :::::..::
TTTGTTTGTTTGTTAACTGTA
mdm-MIR122N None TATGGTTAAGAAACAAGCAGA NOVEL MDP0000356827no hits with E-value < 1e-10 2.5 19.755 1 - 21 658 - 678 Cleavage 
AGACGAACAAAGAATTGGTAT
::::::: ::::: .::::::
TCTGCTTCTTTCTCGACCATA
mdm-MIR122N None TATGGTTAAGAAACAAGCAGA NOVEL MDP0000752388no hits with E-value < 1e-10 3 13.219 1 - 21 841 - 861 Cleavage 
AGACGAACAAAGAATTGGTAT
:.:::::  ::.:::::::::
TTTGCTTAATTTTTAACCATA

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KNOWN: 0 (0)
KNOWN and CONSERVED: 0 (0)
CONSERVED: 0 (0)
NOVEL: 1 (9)