HOME miRNA TABLE miRNA DEEP-SEQ IN SILICO TARGETS DEGRADOME TARGETS GOrilla INTRONS DOWNLOADS CONTACT




Malus Domestica - miRNA targets Filter by mature miRNA sequence or return to all        Help


name

mature homolog

mature

mature status

target

best UniProt hit

expectation

UPE

miRNA start-end

target start-end

inhibition

miRNA:target duplex
mdm-MIR161N tcc-miR169g TAGCCAGGGATGACTTGCCT CONSERVED TC60623no hits with E-value < 1e-10 1.5 23.49 1 - 20 328 - 347 Cleavage 
TCCGTTCAGTAGGGACCGAT
:::::: ::::::.::::::
AGGCAAATCATCCTTGGCTA
mdm-MIR161N tcc-miR169g TAGCCAGGGATGACTTGCCT CONSERVED TC73028no hits with E-value < 1e-10 2.5 16.179 1 - 20 312 - 331 Cleavage 
TCCGTTCAGTAGGGACCGAT
:::::: ::::::.:::::
AGGCAATTCATCCTTGGCTT
mdm-MIR161N tcc-miR169g TAGCCAGGGATGACTTGCCT CONSERVED TC82506no hits with E-value < 1e-10 3 16.59 1 - 20 647 - 666 Cleavage 
TCCGTTCAGTAGGGACCGAT
.::::: ::::::.:::::
GGGCAAATCATCCTTGGCTT
mdm-MIR161N tcc-miR169g TAGCCAGGGATGACTTGCCT CONSERVED TC67449no hits with E-value < 1e-10 3 15.304 1 - 20 1283 - 1302 Cleavage 
TCCGTTCAGTAGGGACCGAT
.::::: ::::::.:::::
GGGCAAATCATCCTTGGCTT
mdm-MIR161N tcc-miR169g TAGCCAGGGATGACTTGCCT CONSERVED MDP0000785523no hits with E-value < 1e-10 2 15.436 1 - 20 993 - 1012 Cleavage 
TCCGTTCAGTAGGGACCGAT
:::::: ::::.:.::::::
AGGCAACTCATTCTTGGCTA
mdm-MIR161N tcc-miR169g TAGCCAGGGATGACTTGCCT CONSERVED MDP0000129029no hits with E-value < 1e-10 2 15.436 1 - 20 1110 - 1129 Cleavage 
TCCGTTCAGTAGGGACCGAT
:::::: ::::.:.::::::
AGGCAACTCATTCTTGGCTA
mdm-MIR161N tcc-miR169g TAGCCAGGGATGACTTGCCT CONSERVED MDP0000588222no hits with E-value < 1e-10 2 15.436 1 - 20 1179 - 1198 Cleavage 
TCCGTTCAGTAGGGACCGAT
:::::: ::::.:.::::::
AGGCAACTCATTCTTGGCTA
mdm-MIR161N tcc-miR169g TAGCCAGGGATGACTTGCCT CONSERVED MDP0000223651no hits with E-value < 1e-10 2.5 14.934 1 - 20 652 - 671 Cleavage 
TCCGTTCAGTAGGGACCGAT
:::::: ::::::.:::::
AGGCAATTCATCCTTGGCTT
mdm-MIR161N tcc-miR169g TAGCCAGGGATGACTTGCCT CONSERVED MDP0000948645no hits with E-value < 1e-10 2.5 12.088 1 - 20 992 - 1011 Cleavage 
TCCGTTCAGTAGGGACCGAT
:::::: ::::::.:::::
AGGCAATTCATCCTTGGCTC
mdm-MIR161N tcc-miR169g TAGCCAGGGATGACTTGCCT CONSERVED MDP0000506954no hits with E-value < 1e-10 2.5 14.934 1 - 20 1240 - 1259 Cleavage 
TCCGTTCAGTAGGGACCGAT
:::::: ::::::.:::::
AGGCAATTCATCCTTGGCTT
mdm-MIR161N tcc-miR169g TAGCCAGGGATGACTTGCCT CONSERVED MDP0000827821no hits with E-value < 1e-10 3 14.568 1 - 20 1243 - 1262 Cleavage 
TCCGTTCAGTAGGGACCGAT
.::::: ::::::.:::::
GGGCAANTCATCCTTGGCTT
mdm-MIR161N tcc-miR169g TAGCCAGGGATGACTTGCCT CONSERVED MDP0000885534Ankyrin repeat-containing protein At3g12360
E-value: 4e-18
more		 2.5 18.052 1 - 20 1149 - 1168 Translation 
TCCGTTCAGTAGGGACCGAT
:::::::::: :..:::.::
AGGCAAGTCAACTTTGGTTA
mdm-MIR161N tcc-miR169g TAGCCAGGGATGACTTGCCT CONSERVED MDP0000263881Protein AUXIN RESPONSE 4
E-value: 9e-137
more		 2.5 18.052 1 - 20 1920 - 1939 Translation 
TCCGTTCAGTAGGGACCGAT
:::::::::: :..:::.::
AGGCAAGTCAACTTTGGTTA
mdm-MIR161N tcc-miR169g TAGCCAGGGATGACTTGCCT CONSERVED MDP0000183865Nuclear transcription factor Y subunit A-7
E-value: 2e-14
more		 3 19.743 1 - 20 668 - 687 Cleavage 
TCCGTTCAGTAGGGACCGAT
:::::: ::::.:.:::::
AGGCAAATCATTCTTGGCTT
mdm-MIR161N tcc-miR169g TAGCCAGGGATGACTTGCCT CONSERVED MDP0000164531Nuclear transcription factor Y subunit A-1
E-value: 5e-21
more		 3 18.781 1 - 20 1215 - 1234 Cleavage 
TCCGTTCAGTAGGGACCGAT
:::::: ::::.:.:::::
AGGCAAATCATTCTTGGCTT
mdm-MIR161N tcc-miR169g TAGCCAGGGATGACTTGCCT CONSERVED MDP0000279028Nuclear transcription factor Y subunit A-7
E-value: 1e-25
more		 3 18.781 1 - 20 1263 - 1282 Cleavage 
TCCGTTCAGTAGGGACCGAT
:::::: ::::.:.:::::
AGGCAAATCATTCTTGGCTT
mdm-MIR161N tcc-miR169g TAGCCAGGGATGACTTGCCT CONSERVED MDP0000778477Peptidyl-prolyl cis-trans isomerase CYP40
E-value: 2e-154
more		 3 16.063 1 - 20 609 - 628 Cleavage 
TCCGTTCAGTAGGGACCGAT
::::: ::.:::: ::::::
AGGCATGTTATCCATGGCTA

Entries Per Page
Displaying Page of


KNOWN: 0 (0)
KNOWN and CONSERVED: 0 (0)
CONSERVED: 1 (17)
NOVEL: 0 (0)