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Malus Domestica - miRNA targets Filter by mature miRNA sequence or return to all        Help


name

mature homolog

mature

mature status

target

best UniProt hit

expectation

UPE

miRNA start-end

target start-end

inhibition

miRNA:target duplex
mdm-MIR169b sbi-miR169o TAGCCAAGGATGATTTGCCTGC KNOWN TC60623no hits with E-value < 1e-10 0 23.49 1 - 22 326 - 347 Cleavage 
CGTCCGTTTAGTAGGAACCGAT
::::::::::::::::::::::
GCAGGCAAATCATCCTTGGCTA
mdm-MIR169b sbi-miR169o TAGCCAAGGATGATTTGCCTGC KNOWN TC82506no hits with E-value < 1e-10 3 16.59 1 - 22 645 - 666 Cleavage 
CGTCCGTTTAGTAGGAACCGAT
 ..::::::::::::::::::
TTGGGCAAATCATCCTTGGCTT
mdm-MIR169b sbi-miR169o TAGCCAAGGATGATTTGCCTGC KNOWN TC67449no hits with E-value < 1e-10 3 15.304 1 - 22 1281 - 1302 Cleavage 
CGTCCGTTTAGTAGGAACCGAT
 ..::::::::::::::::::
TTGGGCAAATCATCCTTGGCTT
mdm-MIR169b sbi-miR169o TAGCCAAGGATGATTTGCCTGC KNOWN TC64758no hits with E-value < 1e-10 3 13.178 1 - 22 710 - 731 Translation 
CGTCCGTTTAGTAGGAACCGAT
:::::.:::: :: .:::::::
GCAGGTAAATGATATTTGGCTA
mdm-MIR169b sbi-miR169o TAGCCAAGGATGATTTGCCTGC KNOWN MDP0000183865Nuclear transcription factor Y subunit A-7
E-value: 2e-14
more		 2.5 19.743 1 - 22 666 - 687 Cleavage 
CGTCCGTTTAGTAGGAACCGAT
 ::::::::::::.:::::::
TCAGGCAAATCATTCTTGGCTT
mdm-MIR169b sbi-miR169o TAGCCAAGGATGATTTGCCTGC KNOWN MDP0000164531Nuclear transcription factor Y subunit A-1
E-value: 5e-21
more		 2.5 18.781 1 - 22 1213 - 1234 Cleavage 
CGTCCGTTTAGTAGGAACCGAT
 ::::::::::::.:::::::
TCAGGCAAATCATTCTTGGCTT
mdm-MIR169b sbi-miR169o TAGCCAAGGATGATTTGCCTGC KNOWN MDP0000279028Nuclear transcription factor Y subunit A-7
E-value: 1e-25
more		 2.5 18.781 1 - 22 1261 - 1282 Cleavage 
CGTCCGTTTAGTAGGAACCGAT
 ::::::::::::.:::::::
TCAGGCAAATCATTCTTGGCTT

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KNOWN: 1 (7)
KNOWN and CONSERVED: 0 (0)
CONSERVED: 0 (0)
NOVEL: 0 (0)