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Malus Domestica - miRNA targets Filter by mature miRNA sequence or return to all        Help


name

mature homolog

mature

mature status

target

best UniProt hit

expectation

UPE

miRNA start-end

target start-end

inhibition

miRNA:target duplex
mdm-MIR123N aly-miR395h-5p GTTCCCTTGACCACTTCATTG CONSERVED TC78859no hits with E-value < 1e-10 3 24.442 1 - 21 342 - 362 Translation 
GTTACTTCACCAGTTCCCTTG
.:::::.:::: ::.::::.:
TAATGAGGTGGACAGGGGAGC
mdm-MIR123N aly-miR395h-5p GTTCCCTTGACCACTTCATTG CONSERVED TC89395no hits with E-value < 1e-10 3 18.386 1 - 21 183 - 203 Translation 
GTTACTTCACCAGTTCCCTTG
::::::. :::: :::::::.
CAATGAGCTGGTGAAGGGAAT
mdm-MIR123N aly-miR395h-5p GTTCCCTTGACCACTTCATTG CONSERVED MDP0000226270Cytochrome P450 81D1
E-value: 9e-115
more		 3 17.263 1 - 21 1179 - 1199 Cleavage 
GTTACTTCACCAGTTCCCTTG
:.::::: : ::::::::::.
CGATGAAATCGTCAAGGGAAT
mdm-MIR123N aly-miR395h-5p GTTCCCTTGACCACTTCATTG CONSERVED MDP0000229508Cytochrome P450 81D1
E-value: 9e-115
more		 3 17.263 1 - 21 1179 - 1199 Cleavage 
GTTACTTCACCAGTTCCCTTG
:.::::: : ::::::::::.
CGATGAAATCGTCAAGGGAAT
mdm-MIR123N aly-miR395h-5p GTTCCCTTGACCACTTCATTG CONSERVED MDP0000147669Potassium transporter 7
E-value: 0.0
more		 3 18.473 1 - 21 2334 - 2354 Translation 
GTTACTTCACCAGTTCCCTTG
::::::. :::: :::::::.
CAATGAGCTGGTGAAGGGAAT
mdm-MIR123N aly-miR395h-5p GTTCCCTTGACCACTTCATTG CONSERVED MDP0000836948no hits with E-value < 1e-10 3 18.072 1 - 21 294 - 314 Translation 
GTTACTTCACCAGTTCCCTTG
::: ::: ::: :::::::::
CAACGAAATGGGCAAGGGAAC

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KNOWN: 0 (0)
KNOWN and CONSERVED: 0 (0)
CONSERVED: 1 (6)
NOVEL: 0 (0)