Malus Domestica - miRNA targets

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Malus Domestica - miRNA targets Filter by mature miRNA sequence or return to all Help

name	mature homolog	mature	mature status	target	best UniProt hit	expectation	UPE	miRNA start-end	target start-end	inhibition	miRNA:target duplex
mdm-MIR152N	None	GGGCGTGATATTCACACACCT	NOVEL	EB108167	no hits with E-value < 1e-10	2.5	23.446	1 - 21	122 - 142	Cleavage	TCCACACACTTATAGTGCGGG .::::::::.::::::: ::: GGGTGTGTGGATATCACACCC
mdm-MIR152N	None	GGGCGTGATATTCACACACCT	NOVEL	TC59956	no hits with E-value < 1e-10	2.5	22.574	1 - 21	1835 - 1855	Cleavage	TCCACACACTTATAGTGCGGG .::::::::.::::::: ::: GGGTGTGTGGATATCACACCC
mdm-MIR152N	None	GGGCGTGATATTCACACACCT	NOVEL	TC94182	no hits with E-value < 1e-10	2.5	20.732	1 - 21	460 - 480	Cleavage	TCCACACACTTATAGTGCGGG ::::::::::::: ::: ::: AGGTGTGTGAATAGCACACCC
mdm-MIR152N	None	GGGCGTGATATTCACACACCT	NOVEL	TC74759	no hits with E-value < 1e-10	2.5	20.25	1 - 21	932 - 952	Cleavage	TCCACACACTTATAGTGCGGG ::::::::::::: ::: ::: AGGTGTGTGAATAGCACACCC
mdm-MIR152N	None	GGGCGTGATATTCACACACCT	NOVEL	TC65898	no hits with E-value < 1e-10	3	13.62	1 - 21	1669 - 1689	Cleavage	TCCACACACTTATAGTGCGGG ::::::::::::: .:: ::: AGGTGTGTGAATAGTACACCC
mdm-MIR152N	None	GGGCGTGATATTCACACACCT	NOVEL	MDP0000290504	no hits with E-value < 1e-10	1.5	15.299	1 - 21	138 - 158	Cleavage	TCCACACACTTATAGTGCGGG ::::::::::::::::: ::: AGGTGTGTGAATATCACACCC
mdm-MIR152N	None	GGGCGTGATATTCACACACCT	NOVEL	MDP0000139316	no hits with E-value < 1e-10	2.5	24.43	1 - 21	3395 - 3415	Cleavage	TCCACACACTTATAGTGCGGG .::::::::.::::::: ::: GGGTGTGTGGATATCACACCC
mdm-MIR152N	None	GGGCGTGATATTCACACACCT	NOVEL	MDP0000231176	no hits with E-value < 1e-10	2.5	23.845	1 - 21	3090 - 3110	Cleavage	TCCACACACTTATAGTGCGGG .::::::::.::::::: ::: GGGTGTGTGGATATCACACCC
mdm-MIR152N	None	GGGCGTGATATTCACACACCT	NOVEL	MDP0000659288	no hits with E-value < 1e-10	2.5	20.114	1 - 21	2188 - 2208	Cleavage	TCCACACACTTATAGTGCGGG .::::::::.::::::: ::: GGGTGTGTGGATATCACACCC
mdm-MIR152N	None	GGGCGTGATATTCACACACCT	NOVEL	MDP0000294776	no hits with E-value < 1e-10	2.5	22.814	1 - 21	85 - 105	Cleavage	TCCACACACTTATAGTGCGGG .:::::::::::::::: .:: GGGTGTGTGAATATCACATCC
mdm-MIR152N	None	GGGCGTGATATTCACACACCT	NOVEL	MDP0000923035	no hits with E-value < 1e-10	2.5	24.361	1 - 21	72 - 92	Cleavage	TCCACACACTTATAGTGCGGG .::::::::.::::::: ::: GGGTGTGTGGATATCACACCC
mdm-MIR152N	None	GGGCGTGATATTCACACACCT	NOVEL	MDP0000162979	no hits with E-value < 1e-10	2.5	22.612	1 - 21	108 - 128	Cleavage	TCCACACACTTATAGTGCGGG .::::::::.::::::: ::: GGGTGTGTGGATATCACACCC
mdm-MIR152N	None	GGGCGTGATATTCACACACCT	NOVEL	MDP0000233321	no hits with E-value < 1e-10	2.5	18.801	1 - 21	187 - 207	Cleavage	TCCACACACTTATAGTGCGGG .::::::::.::::::: ::: GGGTGTGTGGATATCACACCC
mdm-MIR152N	None	GGGCGTGATATTCACACACCT	NOVEL	MDP0000481445	no hits with E-value < 1e-10	2.5	14.727	1 - 21	123 - 143	Cleavage	TCCACACACTTATAGTGCGGG : :::::::.::::::: ::: ANGTGTGTGGATATCACACCC
mdm-MIR152N	None	GGGCGTGATATTCACACACCT	NOVEL	MDP0000934607	no hits with E-value < 1e-10	2.5	17.983	1 - 21	1119 - 1139	Cleavage	TCCACACACTTATAGTGCGGG .::::::::.::::::: ::: GGGTGTGTGGATATCACACCC
mdm-MIR152N	None	GGGCGTGATATTCACACACCT	NOVEL	MDP0000651073	no hits with E-value < 1e-10	2.5	22.813	1 - 21	156 - 176	Cleavage	TCCACACACTTATAGTGCGGG .::::::::.::::::: ::: GGGTGTGTGGATATCACACCC
mdm-MIR152N	None	GGGCGTGATATTCACACACCT	NOVEL	MDP0000119148	no hits with E-value < 1e-10	2.5	15.832	1 - 21	2091 - 2111	Cleavage	TCCACACACTTATAGTGCGGG ::::::::: ::::::: ::: AGGTGTGTGTATATCACACCC
mdm-MIR152N	None	GGGCGTGATATTCACACACCT	NOVEL	MDP0000135831	no hits with E-value < 1e-10	2.5	15.832	1 - 21	2034 - 2054	Cleavage	TCCACACACTTATAGTGCGGG ::::::::: ::::::: ::: AGGTGTGTGTATATCACACCC
mdm-MIR152N	None	GGGCGTGATATTCACACACCT	NOVEL	MDP0000383777	no hits with E-value < 1e-10	2.5	20.395	1 - 21	1887 - 1907	Cleavage	TCCACACACTTATAGTGCGGG ::::::::::::: ::: ::: AGGTGTGTGAATAGCACACCC
mdm-MIR152N	None	GGGCGTGATATTCACACACCT	NOVEL	MDP0000239288	no hits with E-value < 1e-10	3	24.862	1 - 21	1867 - 1887	Cleavage	TCCACACACTTATAGTGCGGG .::::::::.::::::: .:: GGGTGTGTGGATATCACATCC
mdm-MIR152N	None	GGGCGTGATATTCACACACCT	NOVEL	MDP0000275840	no hits with E-value < 1e-10	3	13.411	1 - 21	83 - 103	Cleavage	TCCACACACTTATAGTGCGGG . ::::::::::::::: :: GNGTGTGTGAATATCACANCC
mdm-MIR152N	None	GGGCGTGATATTCACACACCT	NOVEL	MDP0000672760	no hits with E-value < 1e-10	3	12.943	1 - 21	82 - 102	Cleavage	TCCACACACTTATAGTGCGGG . ::::::::::::::: :: GNGTGTGTGAATATCACANCC
mdm-MIR152N	None	GGGCGTGATATTCACACACCT	NOVEL	MDP0000168773	no hits with E-value < 1e-10	3	13.411	1 - 21	83 - 103	Cleavage	TCCACACACTTATAGTGCGGG . ::::::::::::::: :: GNGTGTGTGAATATCACANCC
mdm-MIR152N	None	GGGCGTGATATTCACACACCT	NOVEL	MDP0000184463	no hits with E-value < 1e-10	3	21.701	1 - 21	158 - 178	Cleavage	TCCACACACTTATAGTGCGGG .: ::::::.::::::: ::: GGNTGTGTGGATATCACACCC

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KNOWN: 0 (0)
KNOWN and CONSERVED: 0 (0)
CONSERVED: 0 (0)
NOVEL: 1 (24)

name

mature homolog

mature

mature status

target

best UniProt hit

expectation

UPE

miRNA start-end

target start-end

inhibition

miRNA:target duplex