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Malus Domestica - miRNA targets Filter by mature miRNA sequence or return to all        Help


name

mature homolog

mature

mature status

target

best UniProt hit

expectation

UPE

miRNA start-end

target start-end

inhibition

miRNA:target duplex
mdm-MIR156ab aly-miR157d-3p GCTCTCTATGCTTCTGTCATC KNOWN and CONSERVED TC66013no hits with E-value < 1e-10 3 21.259 1 - 21 1667 - 1687 Cleavage 
CTACTGTCTTCGTATCTCTCG
 ::::::::.:::: ::::::
CATGACAGAGGCATTGAGAGC
mdm-MIR156ab aly-miR157d-3p GCTCTCTATGCTTCTGTCATC KNOWN and CONSERVED TC61452no hits with E-value < 1e-10 2.5 21.048 1 - 21 879 - 899 Cleavage 
CTACTGTCTTCGTATCTCTCG
: :::::::::::::::: ::
GCTGACAGAAGCATAGAGTGC
mdm-MIR156ab aly-miR157d-3p GCTCTCTATGCTTCTGTCATC KNOWN and CONSERVED TC63887no hits with E-value < 1e-10 3 19.829 1 - 21 1229 - 1249 Cleavage 
CTACTGTCTTCGTATCTCTCG
::::.::::::.::::::. :
GATGGCAGAAGTATAGAGGTC
mdm-MIR156ab aly-miR157d-3p GCTCTCTATGCTTCTGTCATC KNOWN and CONSERVED TC71602no hits with E-value < 1e-10 3 17.24 1 - 21 471 - 491 Cleavage 
CTACTGTCTTCGTATCTCTCG
 ::  ::::::::::::::::
CATTTCAGAAGCATAGAGAGC
mdm-MIR156ab aly-miR157d-3p GCTCTCTATGCTTCTGTCATC KNOWN and CONSERVED TC74491no hits with E-value < 1e-10 3 19.672 1 - 21 263 - 283 Cleavage 
CTACTGTCTTCGTATCTCTCG
::::: :: :::: :::::::
GATGAGAGTAGCAGAGAGAGC
mdm-MIR156ab aly-miR157d-3p GCTCTCTATGCTTCTGTCATC KNOWN and CONSERVED MDP0000284115no hits with E-value < 1e-10 3 21.602 1 - 21 390 - 410 Cleavage 
CTACTGTCTTCGTATCTCTCG
 ::::::::.:::: ::::::
CATGACAGAGGCATTGAGAGC
mdm-MIR156ab aly-miR157d-3p GCTCTCTATGCTTCTGTCATC KNOWN and CONSERVED MDP0000291818no hits with E-value < 1e-10 3 21.602 1 - 21 2088 - 2108 Cleavage 
CTACTGTCTTCGTATCTCTCG
 ::::::::.:::: ::::::
CATGACAGAGGCATTGAGAGC
mdm-MIR156ab aly-miR157d-3p GCTCTCTATGCTTCTGTCATC KNOWN and CONSERVED MDP0000545249Alcohol dehydrogenase
E-value: 6e-121
more		 2.5 21.327 1 - 21 760 - 780 Cleavage 
CTACTGTCTTCGTATCTCTCG
: :::::::::::::::: ::
GCTGACAGAAGCATAGAGTGC
mdm-MIR156ab aly-miR157d-3p GCTCTCTATGCTTCTGTCATC KNOWN and CONSERVED MDP0000256280Alcohol dehydrogenase
E-value: 3e-156
more		 2.5 21.327 1 - 21 1076 - 1096 Cleavage 
CTACTGTCTTCGTATCTCTCG
: :::::::::::::::: ::
GCTGACAGAAGCATAGAGTGC
mdm-MIR156ab aly-miR157d-3p GCTCTCTATGCTTCTGTCATC KNOWN and CONSERVED MDP0000276665Alcohol dehydrogenase
E-value: 3e-162
more		 2.5 21.327 1 - 21 948 - 968 Cleavage 
CTACTGTCTTCGTATCTCTCG
: :::::::::::::::: ::
GCTGACAGAAGCATAGAGTGC
mdm-MIR156ab aly-miR157d-3p GCTCTCTATGCTTCTGTCATC KNOWN and CONSERVED MDP0000877582TMV resistance protein N
E-value: 4e-25
more		 3 10.898 1 - 21 407 - 427 Cleavage 
CTACTGTCTTCGTATCTCTCG
 ::  ::::::::::::::::
CATTTCAGAAGCATAGAGAGC
mdm-MIR156ab aly-miR157d-3p GCTCTCTATGCTTCTGTCATC KNOWN and CONSERVED MDP0000177665Transcriptional corepressor LEUNIG
E-value: 1e-104
more		 3 14.145 1 - 21 713 - 733 Cleavage 
CTACTGTCTTCGTATCTCTCG
 ::  ::::::::::::::::
CATTTCAGAAGCATAGAGAGC

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KNOWN: 0 (0)
KNOWN and CONSERVED: 1 (12)
CONSERVED: 0 (0)
NOVEL: 0 (0)