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Malus Domestica - miRNA targets Filter by mature miRNA sequence or return to all        Help


name

mature homolog

mature

mature status

target

best UniProt hit

expectation

UPE

miRNA start-end

target start-end

inhibition

miRNA:target duplex
mdm-MIR179N None GAGGATGAGCTTCGGCGGTGA NOVEL TC74566no hits with E-value < 1e-10 3 12.673 1 - 21 54 - 74 Cleavage 
AGTGGCGGCTTCGAGTAGGAG
::: :::.::::::: :::::
TCAACGCTGAAGCTCCTCCTC
mdm-MIR179N None GAGGATGAGCTTCGGCGGTGA NOVEL MDP0000333289no hits with E-value < 1e-10 3 22.676 1 - 21 332 - 352 Cleavage 
AGTGGCGGCTTCGAGTAGGAG
:.::: ..::::::::::::.
TTACCCTTGAAGCTCATCCTT
mdm-MIR179N None GAGGATGAGCTTCGGCGGTGA NOVEL MDP0000250600Peptidyl-prolyl cis-trans isomerase FKBP4
E-value: 2e-26
more		 3 20.223 1 - 21 1428 - 1448 Cleavage 
AGTGGCGGCTTCGAGTAGGAG
::: ::.:::::.:::::.:.
TCAACGTCGAAGTTCATCTTT

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KNOWN: 0 (0)
KNOWN and CONSERVED: 0 (0)
CONSERVED: 0 (0)
NOVEL: 1 (3)