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Malus Domestica - miRNA targets Filter by mature miRNA sequence or return to all        Help


name

mature homolog

mature

mature status

target

best UniProt hit

expectation

UPE

miRNA start-end

target start-end

inhibition

miRNA:target duplex
mdm-MIR117N zma-miR319a-5p GAGCTTTCTTCAGTCCACTC CONSERVED TC94787no hits with E-value < 1e-10 3 20.841 1 - 20 183 - 202 Translation 
CTCACCTGACTTCTTTCGAG
::::::. :: :::.:::::
GAGTGGGGTGCAGAGAGCTC
mdm-MIR117N zma-miR319a-5p GAGCTTTCTTCAGTCCACTC CONSERVED TC91646no hits with E-value < 1e-10 3 18.903 1 - 20 311 - 330 Cleavage 
CTCACCTGACTTCTTTCGAG
:: :::.::::. :::::::
GACTGGGCTGAGTAAAGCTC
mdm-MIR117N zma-miR319a-5p GAGCTTTCTTCAGTCCACTC CONSERVED MDP0000538670Pre-mRNA-processing factor 6
E-value: 0.0
more		 2 20.305 1 - 20 2499 - 2518 Cleavage 
CTCACCTGACTTCTTTCGAG
::::::.::::. :::::::
GAGTGGGCTGAGTAAAGCTC
mdm-MIR117N zma-miR319a-5p GAGCTTTCTTCAGTCCACTC CONSERVED MDP0000506415Centromere/kinetochore protein zw10 homolog
E-value: 7e-54
more		 2.5 21.07 1 - 20 684 - 703 Cleavage 
CTCACCTGACTTCTTTCGAG
::: : .:::::::::::::
GAGAGAGCTGAAGAAAGCTC
mdm-MIR117N zma-miR319a-5p GAGCTTTCTTCAGTCCACTC CONSERVED MDP0000415728Centromere/kinetochore protein zw10 homolog
E-value: 9e-60
more		 2.5 19.575 1 - 20 750 - 769 Cleavage 
CTCACCTGACTTCTTTCGAG
::: : .:::::::::::::
GAGAGAGCTGAAGAAAGCTC
mdm-MIR117N zma-miR319a-5p GAGCTTTCTTCAGTCCACTC CONSERVED MDP0000468056Centromere/kinetochore protein zw10 homolog
E-value: 2e-132
more		 2.5 24.443 1 - 20 2631 - 2650 Cleavage 
CTCACCTGACTTCTTTCGAG
::: : .:::::::::::::
GAGGGAGCTGAAGAAAGCTC
mdm-MIR117N zma-miR319a-5p GAGCTTTCTTCAGTCCACTC CONSERVED MDP0000427095Cysteine-rich repeat secretory protein 3
E-value: 1e-65
more		 3 15.508 1 - 20 577 - 596 Translation 
CTCACCTGACTTCTTTCGAG
::::::. :: :::.:::::
GAGTGGGGTGCAGAGAGCTC
mdm-MIR117N zma-miR319a-5p GAGCTTTCTTCAGTCCACTC CONSERVED MDP0000216803Cysteine-rich repeat secretory protein 3
E-value: 2e-101
more		 3 15.508 1 - 20 936 - 955 Translation 
CTCACCTGACTTCTTTCGAG
::::::. :: :::.:::::
GAGTGGGGTGCAGAGAGCTC
mdm-MIR117N zma-miR319a-5p GAGCTTTCTTCAGTCCACTC CONSERVED MDP0000253714Cysteine-rich repeat secretory protein 3
E-value: 2e-101
more		 3 20.841 1 - 20 933 - 952 Translation 
CTCACCTGACTTCTTTCGAG
::::::. :: :::.:::::
GAGTGGGGTGCAGAGAGCTC

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KNOWN: 0 (0)
KNOWN and CONSERVED: 0 (0)
CONSERVED: 1 (9)
NOVEL: 0 (0)