Malus Domestica - miRNA targets

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Malus Domestica - miRNA targets Filter by mature miRNA sequence or return to all Help

name	mature homolog	mature	mature status	target	best UniProt hit	expectation	UPE	miRNA start-end	target start-end	inhibition	miRNA:target duplex
mdm-MIR14N	None	CTTGCCGATAGATTTGGGGAG	NOVEL	EB150059	no hits with E-value < 1e-10	2.5	12.898	1 - 21	10 - 30	Cleavage	GAGGGGTTTAGATAGCCGTTC .:::::::.::::: :::::: TTCCCCAAGTCTATAGGCAAG
mdm-MIR14N	None	CTTGCCGATAGATTTGGGGAG	NOVEL	MDP0000193561	Disease resistance protein RGA2 E-value: 1e-34 more	0	18.688	1 - 21	973 - 993	Cleavage	GAGGGGTTTAGATAGCCGTTC ::::::::::::::::::::: CTCCCCAAATCTATCGGCAAG
mdm-MIR14N	None	CTTGCCGATAGATTTGGGGAG	NOVEL	MDP0000295375	Putative disease resistance protein RGA3 E-value: 3e-38 more	0	13.388	1 - 21	304 - 324	Cleavage	GAGGGGTTTAGATAGCCGTTC ::::::::::::::::::::: CTCCCCAAATCTATCGGCAAG
mdm-MIR14N	None	CTTGCCGATAGATTTGGGGAG	NOVEL	MDP0000133294	Disease resistance protein RGA2 E-value: 8e-41 more	0	18.833	1 - 21	1063 - 1083	Cleavage	GAGGGGTTTAGATAGCCGTTC ::::::::::::::::::::: CTCCCCAAATCTATCGGCAAG
mdm-MIR14N	None	CTTGCCGATAGATTTGGGGAG	NOVEL	MDP0000308635	Putative disease resistance protein RGA3 E-value: 6e-59 more	0.5	12.985	1 - 21	1282 - 1302	Cleavage	GAGGGGTTTAGATAGCCGTTC ::::::::::::::.:::::: CTCCCCAAATCTATTGGCAAG
mdm-MIR14N	None	CTTGCCGATAGATTTGGGGAG	NOVEL	MDP0000292984	Putative disease resistance protein RGA3 E-value: 7e-66 more	0.5	15.563	1 - 21	949 - 969	Cleavage	GAGGGGTTTAGATAGCCGTTC ::::::::::::::.:::::: CTCCCCAAATCTATTGGCAAG
mdm-MIR14N	None	CTTGCCGATAGATTTGGGGAG	NOVEL	MDP0000272830	Putative disease resistance protein RGA3 E-value: 2e-103 more	0.5	11.489	1 - 21	2113 - 2133	Cleavage	GAGGGGTTTAGATAGCCGTTC ::::::::::::::.:::::: CTCCCCAAATCTATTGGCAAG
mdm-MIR14N	None	CTTGCCGATAGATTTGGGGAG	NOVEL	MDP0000272762	Putative disease resistance protein RGA3 E-value: 2e-35 more	1	12.64	1 - 21	880 - 900	Cleavage	GAGGGGTTTAGATAGCCGTTC :::::.::::::::.:::::: CTCCCTAAATCTATTGGCAAG
mdm-MIR14N	None	CTTGCCGATAGATTTGGGGAG	NOVEL	MDP0000309588	Putative disease resistance protein RGA3 E-value: 3e-48 more	1	11.815	1 - 21	880 - 900	Cleavage	GAGGGGTTTAGATAGCCGTTC :::::.::::::::.:::::: CTCCCTAAATCTATTGGCAAG
mdm-MIR14N	None	CTTGCCGATAGATTTGGGGAG	NOVEL	MDP0000223201	Putative disease resistance protein RGA3 E-value: 1e-65 more	1	10.903	1 - 21	1048 - 1068	Cleavage	GAGGGGTTTAGATAGCCGTTC ::::::::::::.:.:::::: CTCCCCAAATCTGTTGGCAAG
mdm-MIR14N	None	CTTGCCGATAGATTTGGGGAG	NOVEL	MDP0000287882	Putative disease resistance RPP13-like protein 1 E-value: 1e-42 more	1.5	24.599	1 - 21	140 - 160	Cleavage	GAGGGGTTTAGATAGCCGTTC :::::::::::.:::::::: ATCCCCAAATCTGTCGGCAAG
mdm-MIR14N	None	CTTGCCGATAGATTTGGGGAG	NOVEL	MDP0000287043	Putative disease resistance RPP13-like protein 1 E-value: 1e-53 more	1.5	24.728	1 - 21	668 - 688	Cleavage	GAGGGGTTTAGATAGCCGTTC :::::::::::.:::::::: ATCCCCAAATCTGTCGGCAAG
mdm-MIR14N	None	CTTGCCGATAGATTTGGGGAG	NOVEL	MDP0000743960	Putative disease resistance RPP13-like protein 1 E-value: 6e-57 more	1.5	24.728	1 - 21	1066 - 1086	Cleavage	GAGGGGTTTAGATAGCCGTTC :::::::::::.:::::::: ATCCCCAAATCTGTCGGCAAG
mdm-MIR14N	None	CTTGCCGATAGATTTGGGGAG	NOVEL	MDP0000275483	no hits with E-value < 1e-10	1.5	16.465	1 - 21	1179 - 1199	Cleavage	GAGGGGTTTAGATAGCCGTTC :::::::::::::: :::::: CTCCCCAAATCTATGGGCAAG
mdm-MIR14N	None	CTTGCCGATAGATTTGGGGAG	NOVEL	MDP0000189702	Putative disease resistance protein RGA4 E-value: 2e-44 more	1.5	12.593	1 - 21	772 - 792	Cleavage	GAGGGGTTTAGATAGCCGTTC :::::::::::::: :::::: CTCCCCAAATCTATAGGCAAG
mdm-MIR14N	None	CTTGCCGATAGATTTGGGGAG	NOVEL	MDP0000676773	Putative disease resistance protein RGA3 E-value: 7e-55 more	1.5	11.788	1 - 21	328 - 348	Cleavage	GAGGGGTTTAGATAGCCGTTC :::::::::::::: :::::: CTCCCCAAATCTATAGGCAAG
mdm-MIR14N	None	CTTGCCGATAGATTTGGGGAG	NOVEL	MDP0000285823	Probable LRR receptor-like serine/threonine-protein kinase At4g2 E-value: 4e-59 more	1.5	15.536	1 - 21	991 - 1011	Cleavage	GAGGGGTTTAGATAGCCGTTC :::::::::::::: :::::: CTCCCCAAATCTATGGGCAAG
mdm-MIR14N	None	CTTGCCGATAGATTTGGGGAG	NOVEL	MDP0000304705	Putative disease resistance protein RGA3 E-value: 1e-128 more	1.5	8.942	1 - 21	6160 - 6180	Cleavage	GAGGGGTTTAGATAGCCGTTC :::::::::::::: :::::: CTCCCCAAATCTATAGGCAAG
mdm-MIR14N	None	CTTGCCGATAGATTTGGGGAG	NOVEL	MDP0000203026	Putative disease resistance RPP13-like protein 1 E-value: 1e-40 more	2	16.863	1 - 21	823 - 843	Cleavage	GAGGGGTTTAGATAGCCGTTC ::::::::::::::::::: ATCCCCAAATCTATCGGCAAA
mdm-MIR14N	None	CTTGCCGATAGATTTGGGGAG	NOVEL	MDP0000243981	Putative disease resistance protein RGA3 E-value: 7e-45 more	2	16.862	1 - 21	925 - 945	Cleavage	GAGGGGTTTAGATAGCCGTTC ::::::::::::::::::: ATCCCCAAATCTATCGGCAAA
mdm-MIR14N	None	CTTGCCGATAGATTTGGGGAG	NOVEL	MDP0000216731	no hits with E-value < 1e-10	1.5	9.791	1 - 21	256 - 276	Cleavage	GAGGGGTTTAGATAGCCGTTC ::::: ::::::::.:::::: CTCCCAAAATCTATTGGCAAG
mdm-MIR14N	None	CTTGCCGATAGATTTGGGGAG	NOVEL	MDP0000778327	Putative disease resistance protein RGA3 E-value: 8e-62 more	2	11.2	1 - 21	472 - 492	Cleavage	GAGGGGTTTAGATAGCCGTTC ::::::::.::::: :::::: CTCCCCAAGTCTATAGGCAAG
mdm-MIR14N	None	CTTGCCGATAGATTTGGGGAG	NOVEL	MDP0000272435	Putative disease resistance protein RGA3 E-value: 3e-69 more	1.5	12.592	1 - 21	1024 - 1044	Cleavage	GAGGGGTTTAGATAGCCGTTC ::::: ::::::::.:::::: CTCCCAAAATCTATTGGCAAG
mdm-MIR14N	None	CTTGCCGATAGATTTGGGGAG	NOVEL	MDP0000263446	Putative disease resistance protein RGA4 E-value: 9e-80 more	2	14.922	1 - 21	1852 - 1872	Cleavage	GAGGGGTTTAGATAGCCGTTC ::::::::.::::: :::::: CTCCCCAAGTCTATAGGCAAG
mdm-MIR14N	None	CTTGCCGATAGATTTGGGGAG	NOVEL	MDP0000195674	Putative disease resistance protein RGA3 E-value: 3e-47 more	2.5	13.239	1 - 21	628 - 648	Cleavage	GAGGGGTTTAGATAGCCGTTC .:::::::.::::: :::::: TTCCCCAAGTCTATAGGCAAG
mdm-MIR14N	None	CTTGCCGATAGATTTGGGGAG	NOVEL	MDP0000725802	Putative disease resistance protein RGA3 E-value: 4e-61 more	2.5	13.239	1 - 21	472 - 492	Cleavage	GAGGGGTTTAGATAGCCGTTC .:::::::.::::: :::::: TTCCCCAAGTCTATAGGCAAG

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KNOWN: 0 (0)
KNOWN and CONSERVED: 0 (0)
CONSERVED: 0 (0)
NOVEL: 1 (26)

name

mature homolog

mature

mature status

target

best UniProt hit

expectation

UPE

miRNA start-end

target start-end

inhibition

miRNA:target duplex