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Malus Domestica - miRNA targets Filter by mature miRNA sequence or return to all        Help


name

mature homolog

mature

mature status

target

best UniProt hit

expectation

UPE

miRNA start-end

target start-end

inhibition

miRNA:target duplex
mdm-MIR395i ath-miR395a CTGAAGTGTTTGGGGGAACTC KNOWN TC65893no hits with E-value < 1e-10 3 19.336 1 - 21 534 - 554 Cleavage 
CTCAAGGGGGTTTGTGAAGTC
:::::::.:::::: :::::
GAGTTCCTCCAAACTCTTCAT
mdm-MIR395i ath-miR395a CTGAAGTGTTTGGGGGAACTC KNOWN TC89279no hits with E-value < 1e-10 3 23.63 1 - 21 408 - 428 Cleavage 
CTCAAGGGGGTTTGTGAAGTC
:::::::.:::::: :::::
GAGTTCCTCCAAACTCTTCAT
mdm-MIR395i ath-miR395a CTGAAGTGTTTGGGGGAACTC KNOWN CN861311no hits with E-value < 1e-10 3 23.405 1 - 21 238 - 258 Cleavage 
CTCAAGGGGGTTTGTGAAGTC
:::::::.:::..:::::: :
GAGTTCCTCCAGGCACTTCTG
mdm-MIR395i ath-miR395a CTGAAGTGTTTGGGGGAACTC KNOWN TC60019no hits with E-value < 1e-10 2.5 23.798 1 - 21 682 - 702 Cleavage 
CTCAAGGGGGTTTGTGAAGTC
::: :::::::..::::::.:
GAGCTCCCCCAGGCACTTCGG
mdm-MIR395i ath-miR395a CTGAAGTGTTTGGGGGAACTC KNOWN MDP0000732978no hits with E-value < 1e-10 0 12.553 1 - 21 244 - 264 Cleavage 
CTCAAGGGGGTTTGTGAAGTC
:::::::::::::::::::::
GAGTTCCCCCAAACACTTCAG
mdm-MIR395i ath-miR395a CTGAAGTGTTTGGGGGAACTC KNOWN MDP0000121656ATP sulfurylase 1, chloroplastic
E-value: 8e-45
more		 3 19.336 1 - 21 334 - 354 Cleavage 
CTCAAGGGGGTTTGTGAAGTC
:::::::.:::::: :::::
GAGTTCCTCCAAACTCTTCAT
mdm-MIR395i ath-miR395a CTGAAGTGTTTGGGGGAACTC KNOWN MDP0000263161ATP sulfurylase 1, chloroplastic
E-value: 0.0
more		 3 23.63 1 - 21 1957 - 1977 Cleavage 
CTCAAGGGGGTTTGTGAAGTC
:::::::.:::::: :::::
GAGTTCCTCCAAACTCTTCAT
mdm-MIR395i ath-miR395a CTGAAGTGTTTGGGGGAACTC KNOWN MDP0000718765Probable pectate lyase 18
E-value: 0.0
more		 2.5 23.798 1 - 21 678 - 698 Cleavage 
CTCAAGGGGGTTTGTGAAGTC
::: :::::::..::::::.:
GAGCTCCCCCAGGCACTTCGG
mdm-MIR395i ath-miR395a CTGAAGTGTTTGGGGGAACTC KNOWN MDP0000573746Probable pectate lyase 18
E-value: 0.0
more		 2.5 23.798 1 - 21 909 - 929 Cleavage 
CTCAAGGGGGTTTGTGAAGTC
::: :::::::..::::::.:
GAGCTCCCCCAGGCACTTCGG
mdm-MIR395i ath-miR395a CTGAAGTGTTTGGGGGAACTC KNOWN MDP0000259307no hits with E-value < 1e-10 3 12.612 1 - 21 1684 - 1704 Cleavage 
CTCAAGGGGGTTTGTGAAGTC
::::::: .::::::.::::
GAGTTCCATCAAACATTTCAT

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KNOWN: 1 (10)
KNOWN and CONSERVED: 0 (0)
CONSERVED: 0 (0)
NOVEL: 0 (0)