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Malus Domestica - miRNA targets Filter by mature miRNA sequence or return to all        Help


name

mature homolog

mature

mature status

target

best UniProt hit

expectation

UPE

miRNA start-end

target start-end

inhibition

miRNA:target duplex
mdm-MIR278N ath-miR395a CTGAAGTGTTTGGGGGAACCC CONSERVED CN994920no hits with E-value < 1e-10 3 13.241 1 - 21 176 - 196 Cleavage 
CCCAAGGGGGTTTGTGAAGTC
:::::.:..:::::.:::::
GGGTTTCTTCAAACGCTTCAT
mdm-MIR278N ath-miR395a CTGAAGTGTTTGGGGGAACCC CONSERVED EB151664no hits with E-value < 1e-10 3 11.319 1 - 21 167 - 187 Cleavage 
CCCAAGGGGGTTTGTGAAGTC
:::::.:..:::::.:::::
GGGTTTCTTCAAACGCTTCAT
mdm-MIR278N ath-miR395a CTGAAGTGTTTGGGGGAACCC CONSERVED TC66255no hits with E-value < 1e-10 3 12.187 1 - 21 174 - 194 Cleavage 
CCCAAGGGGGTTTGTGAAGTC
:::::.:..:::::.:::::
GGGTTTCTTCAAACGCTTCAT
mdm-MIR278N ath-miR395a CTGAAGTGTTTGGGGGAACCC CONSERVED CV084125no hits with E-value < 1e-10 3 14.908 1 - 21 201 - 221 Cleavage 
CCCAAGGGGGTTTGTGAAGTC
:::: .:.::::::::::::
GGGTGTCTCCAAACACTTCAT
mdm-MIR278N ath-miR395a CTGAAGTGTTTGGGGGAACCC CONSERVED TC64554no hits with E-value < 1e-10 3 14.953 1 - 21 193 - 213 Cleavage 
CCCAAGGGGGTTTGTGAAGTC
:::: .:.::::::::::::
GGGTGTCTCCAAACACTTCAT
mdm-MIR278N ath-miR395a CTGAAGTGTTTGGGGGAACCC CONSERVED TC69193no hits with E-value < 1e-10 3 14.904 1 - 21 83 - 103 Cleavage 
CCCAAGGGGGTTTGTGAAGTC
:::: .:.::::::::::::
GGGTGTCTCCAAACACTTCAT
mdm-MIR278N ath-miR395a CTGAAGTGTTTGGGGGAACCC CONSERVED MDP0000732978no hits with E-value < 1e-10 1 12.553 1 - 21 244 - 264 Cleavage 
CCCAAGGGGGTTTGTGAAGTC
: :::::::::::::::::::
GAGTTCCCCCAAACACTTCAG
mdm-MIR278N ath-miR395a CTGAAGTGTTTGGGGGAACCC CONSERVED MDP0000301372Pentatricopeptide repeat-containing protein At1g09820
E-value: 1e-92
more		 3 19.647 1 - 21 326 - 346 Translation 
CCCAAGGGGGTTTGTGAAGTC
:::::.:::: ::::::::.
GGGTTTCCCCCAACACTTCGA
mdm-MIR278N ath-miR395a CTGAAGTGTTTGGGGGAACCC CONSERVED MDP0000729657Pentatricopeptide repeat-containing protein At1g09820
E-value: 0.0
more		 3 19.647 1 - 21 1577 - 1597 Translation 
CCCAAGGGGGTTTGTGAAGTC
:::::.:::: ::::::::.
GGGTTTCCCCCAACACTTCGA
mdm-MIR278N ath-miR395a CTGAAGTGTTTGGGGGAACCC CONSERVED MDP0000293368no hits with E-value < 1e-10 3 11.457 1 - 21 2290 - 2310 Cleavage 
CCCAAGGGGGTTTGTGAAGTC
:: ::..:.::::::.:::::
GGATTTTCTCAAACATTTCAG

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KNOWN: 0 (0)
KNOWN and CONSERVED: 0 (0)
CONSERVED: 1 (10)
NOVEL: 0 (0)