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Malus Domestica - miRNA targets Filter by mature miRNA sequence or return to all        Help


name

mature homolog

mature

mature status

target

best UniProt hit

expectation

UPE

miRNA start-end

target start-end

inhibition

miRNA:target duplex
mdm-MIR2118a mdm-miR2118a CTACCGATGCCACTAAGTCCCA KNOWN CN863022no hits with E-value < 1e-10 2 15.969 1 - 22 228 - 249 Cleavage 
ACCCTGAATCACCGTAGCCATC
:::::.::.::::::::::::
TGGGATTTGGTGGCATCGGTAA
mdm-MIR2118a mdm-miR2118a CTACCGATGCCACTAAGTCCCA KNOWN TC93098no hits with E-value < 1e-10 2 13.15 1 - 22 157 - 178 Cleavage 
ACCCTGAATCACCGTAGCCATC
:::::.::.::::::::::::
TGGGATTTGGTGGCATCGGTAA
mdm-MIR2118a mdm-miR2118a CTACCGATGCCACTAAGTCCCA KNOWN TC78354no hits with E-value < 1e-10 2.5 22.317 1 - 22 311 - 332 Cleavage 
ACCCTGAATCACCGTAGCCATC
::::: ::.::::::::::::
TGGGAGTTGGTGGCATCGGTAA
mdm-MIR2118a mdm-miR2118a CTACCGATGCCACTAAGTCCCA KNOWN CV657761no hits with E-value < 1e-10 3 18.388 1 - 22 119 - 140 Translation 
ACCCTGAATCACCGTAGCCATC
::::: :::::: ::::::::
TGGGAGTTAGTGACATCGGTAA
mdm-MIR2118a mdm-miR2118a CTACCGATGCCACTAAGTCCCA KNOWN MDP0000485327no hits with E-value < 1e-10 2 15.758 1 - 22 379 - 400 Cleavage 
ACCCTGAATCACCGTAGCCATC
:::::.::.::::::::::::
TGGGATTTGGTGGCATCGGTAA
mdm-MIR2118a mdm-miR2118a CTACCGATGCCACTAAGTCCCA KNOWN MDP0000347747no hits with E-value < 1e-10 2.5 22.317 1 - 22 132 - 153 Cleavage 
ACCCTGAATCACCGTAGCCATC
::::: ::.::::::::::::
TGGGAGTTGGTGGCATCGGTAA

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KNOWN: 1 (6)
KNOWN and CONSERVED: 0 (0)
CONSERVED: 0 (0)
NOVEL: 0 (0)