Malus Domestica - miRNA targets

HOME miRNA TABLE miRNA DEEP-SEQ IN SILICO TARGETS DEGRADOME TARGETS GOrilla INTRONS DOWNLOADS CONTACT

Malus Domestica - miRNA targets Filter by mature miRNA sequence or return to all Help

name	mature homolog	mature	mature status	target	best UniProt hit	expectation	UPE	miRNA start-end	target start-end	inhibition	miRNA:target duplex
mdm-MIR212N	None	CATGCCTAATTCAAAAGCCCT	NOVEL	TC76331	no hits with E-value < 1e-10	0	15.503	1 - 21	449 - 469	Cleavage	TCCCGAAAACTTAATCCGTAC ::::::::::::::::::::: AGGGCTTTTGAATTAGGCATG
mdm-MIR212N	None	CATGCCTAATTCAAAAGCCCT	NOVEL	CN581164	no hits with E-value < 1e-10	3	22.943	1 - 21	170 - 190	Translation	TCCCGAAAACTTAATCCGTAC ::::::::: :: ::::::: AGGGCTTTTCAAAGAGGCATG
mdm-MIR212N	None	CATGCCTAATTCAAAAGCCCT	NOVEL	TC79454	no hits with E-value < 1e-10	3	18.117	1 - 21	437 - 457	Translation	TCCCGAAAACTTAATCCGTAC ::::::: :::: ::::::: AGGGCTTGTGAAGGAGGCATG
mdm-MIR212N	None	CATGCCTAATTCAAAAGCCCT	NOVEL	MDP0000278387	no hits with E-value < 1e-10	1	23.76	1 - 21	1528 - 1548	Cleavage	TCCCGAAAACTTAATCCGTAC ::: ::::::::::::::::: AGGCCTTTTGAATTAGGCATG
mdm-MIR212N	None	CATGCCTAATTCAAAAGCCCT	NOVEL	MDP0000255887	SKP1-like protein 1A E-value: 1e-44 more	2.5	15.807	1 - 21	625 - 645	Cleavage	TCCCGAAAACTTAATCCGTAC ::::.:::::::::.::.:: AGGGTTTTTGAATTGGGTATT
mdm-MIR212N	None	CATGCCTAATTCAAAAGCCCT	NOVEL	MDP0000279197	no hits with E-value < 1e-10	2	19.643	1 - 21	1547 - 1567	Translation	TCCCGAAAACTTAATCCGTAC ::: ::::::: ::::::::: AGGCCTTTTGATTTAGGCATG
mdm-MIR212N	None	CATGCCTAATTCAAAAGCCCT	NOVEL	MDP0000280486	no hits with E-value < 1e-10	2	22.141	1 - 21	1543 - 1563	Translation	TCCCGAAAACTTAATCCGTAC ::: ::::::: ::::::::: AGGCCTTTTGATTTAGGCATG
mdm-MIR212N	None	CATGCCTAATTCAAAAGCCCT	NOVEL	MDP0000440829	no hits with E-value < 1e-10	2.5	13.377	1 - 21	1554 - 1574	Cleavage	TCCCGAAAACTTAATCCGTAC ::: ::::::::::::::: : AGGCCTTTTGAATTAGGCAAG

Entries Per Page

Displaying Page of

KNOWN: 0 (0)
KNOWN and CONSERVED: 0 (0)
CONSERVED: 0 (0)
NOVEL: 1 (8)