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Malus Domestica - miRNA targets Filter by mature miRNA sequence or return to all        Help


name

mature homolog

mature

mature status

target

best UniProt hit

expectation

UPE

miRNA start-end

target start-end

inhibition

miRNA:target duplex
mdm-MIR125N ath-miR169b CAGCCAAGGATGACTTGCCGG CONSERVED TC66547no hits with E-value < 1e-10 2.5 16.956 1 - 21 476 - 496 Cleavage 
GGCCGTTCAGTAGGAACCGAC
::::::: ::::.:::::::
CCGGCAACTCATTCTTGGCTT
mdm-MIR125N ath-miR169b CAGCCAAGGATGACTTGCCGG CONSERVED TC63472no hits with E-value < 1e-10 2.5 23.576 1 - 21 1243 - 1263 Cleavage 
GGCCGTTCAGTAGGAACCGAC
 :::::: ::::.::::::::
GCGGCAATTCATTCTTGGCTG
mdm-MIR125N ath-miR169b CAGCCAAGGATGACTTGCCGG CONSERVED EB146668no hits with E-value < 1e-10 2.5 16.682 1 - 21 235 - 255 Translation 
GGCCGTTCAGTAGGAACCGAC
:::: .:::::: ::::::::
CCGGGGAGTCATACTTGGCTG
mdm-MIR125N ath-miR169b CAGCCAAGGATGACTTGCCGG CONSERVED TC70473no hits with E-value < 1e-10 3 23.813 1 - 21 342 - 362 Cleavage 
GGCCGTTCAGTAGGAACCGAC
..:: ::::.::::::::.::
TTGGAAAGTTATCCTTGGTTG
mdm-MIR125N ath-miR169b CAGCCAAGGATGACTTGCCGG CONSERVED TC65169no hits with E-value < 1e-10 3 24.225 1 - 21 243 - 263 Cleavage 
GGCCGTTCAGTAGGAACCGAC
..:: ::::.::::::::.::
TTGGAAAGTTATCCTTGGTTG
mdm-MIR125N ath-miR169b CAGCCAAGGATGACTTGCCGG CONSERVED TC60623no hits with E-value < 1e-10 3 23.49 1 - 21 327 - 347 Cleavage 
GGCCGTTCAGTAGGAACCGAC
: ::::: ::::::::::::
CAGGCAAATCATCCTTGGCTA
mdm-MIR125N ath-miR169b CAGCCAAGGATGACTTGCCGG CONSERVED MDP0000146933Nuclear transcription factor Y subunit A-9
E-value: 3e-25
more		 2.5 23.276 1 - 21 1658 - 1678 Cleavage 
GGCCGTTCAGTAGGAACCGAC
 :::::: ::::.::::::::
GCGGCAATTCATTCTTGGCTG
mdm-MIR125N ath-miR169b CAGCCAAGGATGACTTGCCGG CONSERVED MDP0000296077Nuclear transcription factor Y subunit A-1
E-value: 9e-56
more		 2.5 17.648 1 - 21 1931 - 1951 Cleavage 
GGCCGTTCAGTAGGAACCGAC
 :::::: ::::.::::::::
GCGGCAATTCATTCTTGGCTG
mdm-MIR125N ath-miR169b CAGCCAAGGATGACTTGCCGG CONSERVED MDP0000434309no hits with E-value < 1e-10 2.5 21.299 1 - 21 2933 - 2953 Cleavage 
GGCCGTTCAGTAGGAACCGAC
.::: :::::::::::::::
TCGGGAAGTCATCCTTGGCTC
mdm-MIR125N ath-miR169b CAGCCAAGGATGACTTGCCGG CONSERVED MDP0000314593Nuclear transcription factor Y subunit A-1
E-value: 2e-17
more		 3 13.762 1 - 21 966 - 986 Cleavage 
GGCCGTTCAGTAGGAACCGAC
: ::::: ::::.:::::::
CNGGCAACTCATTCTTGGCTT

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KNOWN: 0 (0)
KNOWN and CONSERVED: 0 (0)
CONSERVED: 1 (10)
NOVEL: 0 (0)