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Malus Domestica - miRNA targets Filter by mature miRNA sequence or return to all        Help


name

mature homolog

mature

mature status

target

best UniProt hit

expectation

UPE

miRNA start-end

target start-end

inhibition

miRNA:target duplex
mdm-MIR56N None CAGAGCAAAACAGTCGTGGAA NOVEL EB142238no hits with E-value < 1e-10 2 21.237 1 - 21 237 - 257 Cleavage 
AAGGTGCTGACAAAACGAGAC
::::::::::::::::.:: :
TTCCACGACTGTTTTGTTCAG
mdm-MIR56N None CAGAGCAAAACAGTCGTGGAA NOVEL TC61831no hits with E-value < 1e-10 2.5 19.256 1 - 21 225 - 245 Cleavage 
AAGGTGCTGACAAAACGAGAC
::::::::.:::::::.:: :
TTCCACGATTGTTTTGTTCAG
mdm-MIR56N None CAGAGCAAAACAGTCGTGGAA NOVEL TC80306no hits with E-value < 1e-10 3 16.125 1 - 21 687 - 707 Cleavage 
AAGGTGCTGACAAAACGAGAC
:: .:.::.:::::::::.::
TTATATGATTGTTTTGCTTTG
mdm-MIR56N None CAGAGCAAAACAGTCGTGGAA NOVEL TC64509no hits with E-value < 1e-10 3 20.049 1 - 21 325 - 345 Translation 
AAGGTGCTGACAAAACGAGAC
:::::.::::: ::::::: :
TTCCATGACTGCTTTGCTCAG
mdm-MIR56N None CAGAGCAAAACAGTCGTGGAA NOVEL MDP0000305310F-box/FBD/LRR-repeat protein At1g13570
E-value: 2e-128
more		 2 21.237 1 - 21 514 - 534 Cleavage 
AAGGTGCTGACAAAACGAGAC
::::::::::::::::.:: :
TTCCACGACTGTTTTGTTCAG
mdm-MIR56N None CAGAGCAAAACAGTCGTGGAA NOVEL MDP0000612477Peroxidase 11
E-value: 2e-127
more		 2 19.511 1 - 21 517 - 537 Cleavage 
AAGGTGCTGACAAAACGAGAC
::::::::::::::::.:: :
TTCCACGACTGTTTTGTTCAG
mdm-MIR56N None CAGAGCAAAACAGTCGTGGAA NOVEL MDP0000581957Peroxidase 11
E-value: 2e-127
more		 2 19.511 1 - 21 517 - 537 Cleavage 
AAGGTGCTGACAAAACGAGAC
::::::::::::::::.:: :
TTCCACGACTGTTTTGTTCAG
mdm-MIR56N None CAGAGCAAAACAGTCGTGGAA NOVEL MDP0000176436Peroxidase 12
E-value: 8e-116
more		 2.5 19.256 1 - 21 517 - 537 Cleavage 
AAGGTGCTGACAAAACGAGAC
::::::::.:::::::.:: :
TTCCACGATTGTTTTGTTCAG
mdm-MIR56N None CAGAGCAAAACAGTCGTGGAA NOVEL MDP0000128576Peroxidase 12
E-value: 5e-45
more		 2.5 19.256 1 - 21 517 - 537 Cleavage 
AAGGTGCTGACAAAACGAGAC
::::::::.:::::::.:: :
TTCCACGATTGTTTTGTTCAG
mdm-MIR56N None CAGAGCAAAACAGTCGTGGAA NOVEL MDP0000304104Peroxidase 9
E-value: 2e-97
more		 3 20.049 1 - 21 2173 - 2193 Translation 
AAGGTGCTGACAAAACGAGAC
:::::.::::: ::::::: :
TTCCATGACTGCTTTGCTCAG
mdm-MIR56N None CAGAGCAAAACAGTCGTGGAA NOVEL MDP0000142485Peroxidase 45
E-value: 1e-126
more		 3 17.641 1 - 21 490 - 510 Translation 
AAGGTGCTGACAAAACGAGAC
::::::::::: ::::.:: :
TTCCACGACTGCTTTGTTCGG
mdm-MIR56N None CAGAGCAAAACAGTCGTGGAA NOVEL MDP0000166235no hits with E-value < 1e-10 3 16.724 1 - 21 874 - 894 Cleavage 
AAGGTGCTGACAAAACGAGAC
:: .:.::.:::::::::.::
TTATATGATTGTTTTGCTTTG

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KNOWN: 0 (0)
KNOWN and CONSERVED: 0 (0)
CONSERVED: 0 (0)
NOVEL: 1 (12)