Malus Domestica - miRNA targets

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Malus Domestica - miRNA targets Filter by mature miRNA sequence or return to all Help

name	mature homolog	mature	mature status	target	best UniProt hit	expectation	UPE	miRNA start-end	target start-end	inhibition	miRNA:target duplex
mdm-MIR120N	None	ATCCCACCATTTATATAGCGA	NOVEL	TC64246	no hits with E-value < 1e-10	2.5	14.11	1 - 21	211 - 231	Cleavage	AGCGATATATTTACCACCCTA : :.:::.:::.::::::::: TGGTTATGTAAGTGGTGGGAT
mdm-MIR120N	None	ATCCCACCATTTATATAGCGA	NOVEL	GO568781	no hits with E-value < 1e-10	3	19.284	1 - 21	14 - 34	Cleavage	AGCGATATATTTACCACCCTA :: .:::::::::::::: :: TCCTTATATAAATGGTGGAAT
mdm-MIR120N	None	ATCCCACCATTTATATAGCGA	NOVEL	TC67044	no hits with E-value < 1e-10	3	12.074	1 - 21	652 - 672	Cleavage	AGCGATATATTTACCACCCTA :: .::::::::::::: ::: TCATTATATAAATGGTGAGAT
mdm-MIR120N	None	ATCCCACCATTTATATAGCGA	NOVEL	TC75922	no hits with E-value < 1e-10	3	18.664	1 - 21	676 - 696	Cleavage	AGCGATATATTTACCACCCTA :: ::::.:::::::: :::: TCTCTATGTAAATGGTTGGAT
mdm-MIR120N	None	ATCCCACCATTTATATAGCGA	NOVEL	TC86333	no hits with E-value < 1e-10	3	13.249	1 - 21	1220 - 1240	Translation	AGCGATATATTTACCACCCTA : :.:::.::: ::::::::: TGGTTATGTAACTGGTGGGAT
mdm-MIR120N	None	ATCCCACCATTTATATAGCGA	NOVEL	DW248969	no hits with E-value < 1e-10	3	20.655	1 - 21	97 - 117	Cleavage	AGCGATATATTTACCACCCTA ::: :::: ::::::::::: TCGGGATATCAATGGTGGGAT
mdm-MIR120N	None	ATCCCACCATTTATATAGCGA	NOVEL	MDP0000338002	no hits with E-value < 1e-10	1	23.079	1 - 21	388 - 408	Cleavage	AGCGATATATTTACCACCCTA :: :::::::::::::::::: TCACTATATAAATGGTGGGAT
mdm-MIR120N	None	ATCCCACCATTTATATAGCGA	NOVEL	MDP0000143798	no hits with E-value < 1e-10	1.5	17.92	1 - 21	1480 - 1500	Cleavage	AGCGATATATTTACCACCCTA :: .::::::::::::::::: TCATTATATAAATGGTGGGAT
mdm-MIR120N	None	ATCCCACCATTTATATAGCGA	NOVEL	MDP0000161195	no hits with E-value < 1e-10	1.5	20.596	1 - 21	2255 - 2275	Cleavage	AGCGATATATTTACCACCCTA :. :::::::::::::::::: TTCCTATATAAATGGTGGGAT
mdm-MIR120N	None	ATCCCACCATTTATATAGCGA	NOVEL	MDP0000174848	no hits with E-value < 1e-10	2	21.893	1 - 21	526 - 546	Cleavage	AGCGATATATTTACCACCCTA :: ::::: :::::::::::: TCACTATACAAATGGTGGGAT
mdm-MIR120N	None	ATCCCACCATTTATATAGCGA	NOVEL	MDP0000461741	no hits with E-value < 1e-10	2.5	21.498	1 - 21	86 - 106	Cleavage	AGCGATATATTTACCACCCTA :: :::::::::::::::: : TCCCTATATAAATGGTGGGTT
mdm-MIR120N	None	ATCCCACCATTTATATAGCGA	NOVEL	MDP0000220329	no hits with E-value < 1e-10	2.5	22.535	1 - 21	86 - 106	Cleavage	AGCGATATATTTACCACCCTA :: :::::::::::::::: : TCCCTATATAAATGGTGGGTT
mdm-MIR120N	None	ATCCCACCATTTATATAGCGA	NOVEL	MDP0000168416	no hits with E-value < 1e-10	2.5	21.105	1 - 21	86 - 106	Cleavage	AGCGATATATTTACCACCCTA :: :::::::::::::::: : TCCCTATATAAATGGTGGGTT
mdm-MIR120N	None	ATCCCACCATTTATATAGCGA	NOVEL	MDP0000123747	no hits with E-value < 1e-10	2.5	22.316	1 - 21	76 - 96	Cleavage	AGCGATATATTTACCACCCTA :: :::::::::::::: ::: TCACTATATAAATGGTGAGAT
mdm-MIR120N	None	ATCCCACCATTTATATAGCGA	NOVEL	MDP0000254058	no hits with E-value < 1e-10	2.5	24.564	1 - 21	2127 - 2147	Cleavage	AGCGATATATTTACCACCCTA :: :::::::::::::::: : TCCCTATATAAATGGTGGGTT
mdm-MIR120N	None	ATCCCACCATTTATATAGCGA	NOVEL	MDP0000203723	Transmembrane 9 superfamily member 3 E-value: 6e-129 more	2.5	14.845	1 - 21	1257 - 1277	Cleavage	AGCGATATATTTACCACCCTA : :.:::.:::.::::::::: TGGTTATGTAAGTGGTGGGAT
mdm-MIR120N	None	ATCCCACCATTTATATAGCGA	NOVEL	MDP0000532759	no hits with E-value < 1e-10	2.5	16.929	1 - 21	37 - 57	Cleavage	AGCGATATATTTACCACCCTA :: .::::::::: ::::::: TCTTTATATAAATTGTGGGAT
mdm-MIR120N	None	ATCCCACCATTTATATAGCGA	NOVEL	MDP0000256596	no hits with E-value < 1e-10	3	13.303	1 - 21	1615 - 1635	Cleavage	AGCGATATATTTACCACCCTA :.: :.:::.:.::::::::: TTGGTGTATGAGTGGTGGGAT
mdm-MIR120N	None	ATCCCACCATTTATATAGCGA	NOVEL	MDP0000198112	no hits with E-value < 1e-10	3	16.832	1 - 21	1141 - 1161	Cleavage	AGCGATATATTTACCACCCTA :.: :.:::.:.::::::::: TTGGTGTATGAGTGGTGGGAT

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KNOWN: 0 (0)
KNOWN and CONSERVED: 0 (0)
CONSERVED: 0 (0)
NOVEL: 1 (19)