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Malus Domestica - miRNA targets Filter by mature miRNA sequence or return to all        Help


name

mature homolog

mature

mature status

target

best UniProt hit

expectation

UPE

miRNA start-end

target start-end

inhibition

miRNA:target duplex
mdm-MIR223N None AGTAACTATAGCTGTTTTCTA NOVEL TC71663no hits with E-value < 1e-10 3 13.444 1 - 21 611 - 631 Cleavage 
ATCTTTTGTCGATATCAATGA
 ::::..:::.:.::::::::
AAGAAGGCAGTTGTAGTTACT
mdm-MIR223N None AGTAACTATAGCTGTTTTCTA NOVEL TC71716no hits with E-value < 1e-10 3 15.891 1 - 21 623 - 643 Cleavage 
ATCTTTTGTCGATATCAATGA
 ::::..:::.:.::::::::
AAGAAGGCAGTTGTAGTTACT
mdm-MIR223N None AGTAACTATAGCTGTTTTCTA NOVEL MDP0000159532no hits with E-value < 1e-10 3 17.467 1 - 21 114 - 134 Cleavage 
ATCTTTTGTCGATATCAATGA
 ::::..:::.:.::::::::
AAGAAGGCAGTTGTAGTTACT
mdm-MIR223N None AGTAACTATAGCTGTTTTCTA NOVEL MDP0000147736no hits with E-value < 1e-10 3 23.29 1 - 21 308 - 328 Cleavage 
ATCTTTTGTCGATATCAATGA
:.:::. :::.:.::::::::
TGGAAGCCAGTTGTAGTTACT
mdm-MIR223N None AGTAACTATAGCTGTTTTCTA NOVEL MDP0000276311no hits with E-value < 1e-10 3 20.416 1 - 21 608 - 628 Cleavage 
ATCTTTTGTCGATATCAATGA
:.:::. :::.:.::::::::
TGGAAGCCAGTTGTAGTTACT
mdm-MIR223N None AGTAACTATAGCTGTTTTCTA NOVEL MDP0000600528no hits with E-value < 1e-10 3 11.106 1 - 21 1382 - 1402 Translation 
ATCTTTTGTCGATATCAATGA
::::::::::. : :::::.:
TAGAAAACAGTAAAAGTTATT

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KNOWN: 0 (0)
KNOWN and CONSERVED: 0 (0)
CONSERVED: 0 (0)
NOVEL: 1 (6)