Malus Domestica - miRNA targets

HOME miRNA TABLE miRNA DEEP-SEQ IN SILICO TARGETS DEGRADOME TARGETS GOrilla INTRONS DOWNLOADS CONTACT

Malus Domestica - miRNA targets Filter by mature miRNA sequence or return to all Help

name	mature homolog	mature	mature status	target	best UniProt hit	expectation	UPE	miRNA start-end	target start-end	inhibition	miRNA:target duplex
mdm-MIR156N	None	AGCCGTTTAATCAAAATCCAA	NOVEL	TC72531	no hits with E-value < 1e-10	2	23.789	1 - 21	698 - 718	Translation	AACCTAAAACTAATTTGCCGA :::::::::::: ::::::: TTGGATTTTGATCCAACGGCT
mdm-MIR156N	None	AGCCGTTTAATCAAAATCCAA	NOVEL	TC93786	no hits with E-value < 1e-10	2.5	17.572	1 - 21	639 - 659	Translation	AACCTAAAACTAATTTGCCGA : :::::::::: :::.:::: TCGGATTTTGATCAAATGGCT
mdm-MIR156N	None	AGCCGTTTAATCAAAATCCAA	NOVEL	CN921374	no hits with E-value < 1e-10	3	17.754	1 - 21	226 - 246	Cleavage	AACCTAAAACTAATTTGCCGA ::::: :: :.:::.:::::: TTGGAATTGGGTTAGACGGCT
mdm-MIR156N	None	AGCCGTTTAATCAAAATCCAA	NOVEL	MDP0000680059	no hits with E-value < 1e-10	1	18.676	1 - 21	31 - 51	Translation	AACCTAAAACTAATTTGCCGA :::::::::::: :::::::: TTGGATTTTGATCAAACGGCT
mdm-MIR156N	None	AGCCGTTTAATCAAAATCCAA	NOVEL	MDP0000316002	no hits with E-value < 1e-10	2	18.204	1 - 21	1018 - 1038	Translation	AACCTAAAACTAATTTGCCGA : :::::::::: :::.:::: TNGGATTTTGATCAAATGGCT
mdm-MIR156N	None	AGCCGTTTAATCAAAATCCAA	NOVEL	MDP0000729532	no hits with E-value < 1e-10	2	15.639	1 - 21	2088 - 2108	Translation	AACCTAAAACTAATTTGCCGA :::::::::::: ::::::: TTGGATTTTGATCTAACGGCT
mdm-MIR156N	None	AGCCGTTTAATCAAAATCCAA	NOVEL	MDP0000301503	no hits with E-value < 1e-10	3	17.562	1 - 21	1415 - 1435	Cleavage	AACCTAAAACTAATTTGCCGA ::::::::::::::::: : : TTGGATTTTGATTAAACAGAT
mdm-MIR156N	None	AGCCGTTTAATCAAAATCCAA	NOVEL	MDP0000242613	no hits with E-value < 1e-10	2	21.676	1 - 21	70 - 90	Translation	AACCTAAAACTAATTTGCCGA :::::::::::: ::::::: TTGGATTTTGATCCAACGGCT
mdm-MIR156N	None	AGCCGTTTAATCAAAATCCAA	NOVEL	MDP0000352268	no hits with E-value < 1e-10	2.5	11.028	1 - 21	35 - 55	Translation	AACCTAAAACTAATTTGCCGA ::: :::::::: ::: : :: TTGNATTTTGATCAAANGNCT

Entries Per Page

Displaying Page of

KNOWN: 0 (0)
KNOWN and CONSERVED: 0 (0)
CONSERVED: 0 (0)
NOVEL: 1 (9)