Malus Domestica - miRNA targets

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Malus Domestica - miRNA targets Filter by mature miRNA sequence or return to all Help

name	mature homolog	mature	mature status	target	best UniProt hit	expectation	UPE	miRNA start-end	target start-end	inhibition	miRNA:target duplex
mdm-MIR89N	None	AGAGAAAATTCATTCCAACGC	NOVEL	TC66929	no hits with E-value < 1e-10	3	15.184	1 - 21	383 - 403	Cleavage	CGCAACCTTACTTAAAAGAGA ::::: ::::::: :::::: GCGTTTGAATGAAGTTTCTCG
mdm-MIR89N	None	AGAGAAAATTCATTCCAACGC	NOVEL	TC63012	no hits with E-value < 1e-10	3	15.67	1 - 21	548 - 568	Cleavage	CGCAACCTTACTTAAAAGAGA ::::: ::::::: :::::: GCGTTTGAATGAAGTTTCTCG
mdm-MIR89N	None	AGAGAAAATTCATTCCAACGC	NOVEL	TC65600	no hits with E-value < 1e-10	3	19.816	1 - 21	592 - 612	Cleavage	CGCAACCTTACTTAAAAGAGA ::::: ::::::: :::::: GCGTTTGAATGAAGTTTCTCG
mdm-MIR89N	None	AGAGAAAATTCATTCCAACGC	NOVEL	TC62207	no hits with E-value < 1e-10	3	22.817	1 - 21	597 - 617	Cleavage	CGCAACCTTACTTAAAAGAGA ::: ::::. :::::::.::: GCGGTGGAGAGAATTTTTTCT
mdm-MIR89N	None	AGAGAAAATTCATTCCAACGC	NOVEL	MDP0000122632	no hits with E-value < 1e-10	2.5	19.52	1 - 21	871 - 891	Cleavage	CGCAACCTTACTTAAAAGAGA :::::::::::::::::: : GCGTTGGAATGAATTTTCCCC
mdm-MIR89N	None	AGAGAAAATTCATTCCAACGC	NOVEL	MDP0000175212	no hits with E-value < 1e-10	2.5	19.52	1 - 21	3082 - 3102	Cleavage	CGCAACCTTACTTAAAAGAGA :::::::::::::::::: : GCGTTGGAATGAATTTTCCCC
mdm-MIR89N	None	AGAGAAAATTCATTCCAACGC	NOVEL	MDP0000267674	TMV resistance protein N E-value: 2e-70 more	2	19.768	1 - 21	1632 - 1652	Cleavage	CGCAACCTTACTTAAAAGAGA :.::::: :::::::::::.: GTGTTGGCATGAATTTTCTTT
mdm-MIR89N	None	AGAGAAAATTCATTCCAACGC	NOVEL	MDP0000173648	no hits with E-value < 1e-10	3	10.565	1 - 21	367 - 387	Translation	CGCAACCTTACTTAAAAGAGA ::::::::::. ::::.::: ACGTTGGAATGGTTTTTTTCT
mdm-MIR89N	None	AGAGAAAATTCATTCCAACGC	NOVEL	MDP0000308097	no hits with E-value < 1e-10	3	16.133	1 - 21	1832 - 1852	Cleavage	CGCAACCTTACTTAAAAGAGA :::::: ::::::::: ::.: GCGTTGAAATGAATTTCCTTT
mdm-MIR89N	None	AGAGAAAATTCATTCCAACGC	NOVEL	MDP0000924440	no hits with E-value < 1e-10	3	19.816	1 - 21	874 - 894	Cleavage	CGCAACCTTACTTAAAAGAGA ::::: ::::::: :::::: GCGTTTGAATGAAGTTTCTCG
mdm-MIR89N	None	AGAGAAAATTCATTCCAACGC	NOVEL	MDP0000120011	Protein neuralized E-value: 2e-12 more	3	20.125	1 - 21	304 - 324	Cleavage	CGCAACCTTACTTAAAAGAGA : :::::: ::.:::::::.: GAGTTGGACTGGATTTTCTTT
mdm-MIR89N	None	AGAGAAAATTCATTCCAACGC	NOVEL	MDP0000123085	ABC transporter G family member 16 E-value: 0.0 more	3	22.811	1 - 21	641 - 661	Cleavage	CGCAACCTTACTTAAAAGAGA ::: ::::. :::::::.::: GCGGTGGAGAGAATTTTTTCT

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KNOWN: 0 (0)
KNOWN and CONSERVED: 0 (0)
CONSERVED: 0 (0)
NOVEL: 1 (12)