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Malus Domestica - miRNA targets Filter by mature miRNA sequence or return to all        Help


name

mature homolog

mature

mature status

target

best UniProt hit

expectation

UPE

miRNA start-end

target start-end

inhibition

miRNA:target duplex
mdm-MIR172o ath-miR172c AGAATCTTGATGATGCTGCAG KNOWN and CONSERVED TC69279no hits with E-value < 1e-10 0.5 13.798 1 - 21 538 - 558 Cleavage 
GACGTCGTAGTAGTTCTAAGA
::::::::::::::.::::::
CTGCAGCATCATCAGGATTCT
mdm-MIR172o ath-miR172c AGAATCTTGATGATGCTGCAG KNOWN and CONSERVED GO503406no hits with E-value < 1e-10 1.5 10.251 1 - 21 536 - 556 Cleavage 
GACGTCGTAGTAGTTCTAAGA
::::::::::::::.:::::
CTGCAGCATCATCAGGATTCC
mdm-MIR172o ath-miR172c AGAATCTTGATGATGCTGCAG KNOWN and CONSERVED TC70636no hits with E-value < 1e-10 1.5 14.358 1 - 21 444 - 464 Cleavage 
GACGTCGTAGTAGTTCTAAGA
::::::::::::::.:::::
CTGCAGCATCATCAGGATTCC
mdm-MIR172o ath-miR172c AGAATCTTGATGATGCTGCAG KNOWN and CONSERVED TC59939no hits with E-value < 1e-10 1.5 11.627 1 - 21 1798 - 1818 Cleavage 
GACGTCGTAGTAGTTCTAAGA
::::::::::::::.:::::
CTGCAGCATCATCAGGATTCC
mdm-MIR172o ath-miR172c AGAATCTTGATGATGCTGCAG KNOWN and CONSERVED CV997844no hits with E-value < 1e-10 2 19.16 1 - 21 244 - 264 Cleavage 
GACGTCGTAGTAGTTCTAAGA
 :::::::::::::::::::
GTGCAGCATCATCAAGATTCA
mdm-MIR172o ath-miR172c AGAATCTTGATGATGCTGCAG KNOWN and CONSERVED TC60060no hits with E-value < 1e-10 2 12.515 1 - 21 1055 - 1075 Cleavage 
GACGTCGTAGTAGTTCTAAGA
.:::::::::::::.:::::
TTGCAGCATCATCAGGATTCC
mdm-MIR172o ath-miR172c AGAATCTTGATGATGCTGCAG KNOWN and CONSERVED TC66380no hits with E-value < 1e-10 2 12.244 1 - 21 1461 - 1481 Cleavage 
GACGTCGTAGTAGTTCTAAGA
.:::::::::::::.:::::
TTGCAGCATCATCAGGATTCC
mdm-MIR172o ath-miR172c AGAATCTTGATGATGCTGCAG KNOWN and CONSERVED GO509900no hits with E-value < 1e-10 3 15.642 1 - 21 289 - 309 Cleavage 
GACGTCGTAGTAGTTCTAAGA
.: :: ::::::::.::::::
TTTCATCATCATCAGGATTCT
mdm-MIR172o ath-miR172c AGAATCTTGATGATGCTGCAG KNOWN and CONSERVED MDP0000181606Ethylene-responsive transcription factor RAP2-7
E-value: 5e-83
more		 0.5 15.005 1 - 21 1550 - 1570 Cleavage 
GACGTCGTAGTAGTTCTAAGA
::::::::::::::.::::::
CTGCAGCATCATCAGGATTCT
mdm-MIR172o ath-miR172c AGAATCTTGATGATGCTGCAG KNOWN and CONSERVED MDP0000296716Ethylene-responsive transcription factor RAP2-7
E-value: 9e-63
more		 0.5 13.796 1 - 21 1556 - 1576 Cleavage 
GACGTCGTAGTAGTTCTAAGA
::::::::::::::.::::::
CTGCAGCATCATCAGGATTCT
mdm-MIR172o ath-miR172c AGAATCTTGATGATGCTGCAG KNOWN and CONSERVED MDP0000200319Floral homeotic protein APETALA 2
E-value: 4e-76
more		 1.5 12.085 1 - 21 1562 - 1582 Cleavage 
GACGTCGTAGTAGTTCTAAGA
::::::::::::::.:::::
CTGCAGCATCATCAGGATTCC
mdm-MIR172o ath-miR172c AGAATCTTGATGATGCTGCAG KNOWN and CONSERVED MDP0000163645Floral homeotic protein APETALA 2
E-value: 3e-74
more		 1.5 23.173 1 - 21 1562 - 1582 Cleavage 
GACGTCGTAGTAGTTCTAAGA
::::::::::::::.:::::
CTGCAGCATCATCAGGATTCC
mdm-MIR172o ath-miR172c AGAATCTTGATGATGCTGCAG KNOWN and CONSERVED MDP0000204900Floral homeotic protein APETALA 2
E-value: 3e-79
more		 1.5 15.336 1 - 21 1823 - 1843 Cleavage 
GACGTCGTAGTAGTTCTAAGA
::::::::::::::.:::::
CTGCAGCATCATCAGGATTCC
mdm-MIR172o ath-miR172c AGAATCTTGATGATGCTGCAG KNOWN and CONSERVED MDP0000137561Floral homeotic protein APETALA 2
E-value: 3e-87
more		 1.5 12.644 1 - 21 1937 - 1957 Cleavage 
GACGTCGTAGTAGTTCTAAGA
::::::::::::::.:::::
CTGCAGCATCATCAGGATTCC
mdm-MIR172o ath-miR172c AGAATCTTGATGATGCTGCAG KNOWN and CONSERVED MDP0000285955Ethylene-responsive transcription factor RAP2-7
E-value: 2e-62
more		 2 12.515 1 - 21 1589 - 1609 Cleavage 
GACGTCGTAGTAGTTCTAAGA
.:::::::::::::.:::::
TTGCAGCATCATCAGGATTCC
mdm-MIR172o ath-miR172c AGAATCTTGATGATGCTGCAG KNOWN and CONSERVED MDP0000281079Ethylene-responsive transcription factor RAP2-7
E-value: 2e-62
more		 2 12.515 1 - 21 1589 - 1609 Cleavage 
GACGTCGTAGTAGTTCTAAGA
.:::::::::::::.:::::
TTGCAGCATCATCAGGATTCC
mdm-MIR172o ath-miR172c AGAATCTTGATGATGCTGCAG KNOWN and CONSERVED MDP0000130802Ethylene-responsive transcription factor RAP2-7
E-value: 6e-63
more		 2 12.244 1 - 21 1589 - 1609 Cleavage 
GACGTCGTAGTAGTTCTAAGA
.:::::::::::::.:::::
TTGCAGCATCATCAGGATTCC
mdm-MIR172o ath-miR172c AGAATCTTGATGATGCTGCAG KNOWN and CONSERVED MDP0000252675no hits with E-value < 1e-10 2.5 20.908 1 - 21 509 - 529 Cleavage 
GACGTCGTAGTAGTTCTAAGA
:: ..:::::::.::::::::
CTTTGGCATCATTAAGATTCT
mdm-MIR172o ath-miR172c AGAATCTTGATGATGCTGCAG KNOWN and CONSERVED MDP0000135349Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase
E-value: 4e-32
more		 3 23.377 1 - 21 570 - 590 Cleavage 
GACGTCGTAGTAGTTCTAAGA
.: ..:::::::.::::::::
TTTTGGCATCATTAAGATTCT
mdm-MIR172o ath-miR172c AGAATCTTGATGATGCTGCAG KNOWN and CONSERVED MDP0000321461Sugar transporter ERD6-like 16
E-value: 4e-15
more		 3 16.689 1 - 21 803 - 823 Cleavage 
GACGTCGTAGTAGTTCTAAGA
.: :: ::::::::.::::::
TTTCATCATCATCAGGATTCT
mdm-MIR172o ath-miR172c AGAATCTTGATGATGCTGCAG KNOWN and CONSERVED MDP0000285150Acid phosphatase 1
E-value: 1e-30
more		 3 15.943 1 - 21 1187 - 1207 Cleavage 
GACGTCGTAGTAGTTCTAAGA
.: :: ::::::::.::::::
TTTCATCATCATCAGGATTCT

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KNOWN: 0 (0)
KNOWN and CONSERVED: 1 (21)
CONSERVED: 0 (0)
NOVEL: 0 (0)