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Malus Domestica - miRNA targets Filter by mature miRNA sequence or return to all        Help


name

mature homolog

mature

mature status

target

best UniProt hit

expectation

UPE

miRNA start-end

target start-end

inhibition

miRNA:target duplex
mdm-MIR391 sly-miR4376 ACGCAGGAGAGATGACGCCGA KNOWN TC94846no hits with E-value < 1e-10 3 19.049 1 - 21 546 - 566 Cleavage 
AGCCGCAGTAGAGAGGACGCA
 ::::::..::::::.::.::
CCGGCGTTGTCTCTCTTGTGT
mdm-MIR391 sly-miR4376 ACGCAGGAGAGATGACGCCGA KNOWN MDP0000207199UPF0136 membrane protein At2g26240
E-value: 1e-17
more		 3 18.827 1 - 21 921 - 941 Cleavage 
AGCCGCAGTAGAGAGGACGCA
 ::::::..::::::.::.::
CCGGCGTTGTCTCTCTTGTGT
mdm-MIR391 sly-miR4376 ACGCAGGAGAGATGACGCCGA KNOWN MDP0000244081UPF0136 membrane protein At2g26240
E-value: 8e-18
more		 3 18.422 1 - 21 932 - 952 Cleavage 
AGCCGCAGTAGAGAGGACGCA
 ::::::..::::::.::.::
CCGGCGTTGTCTCTCTTGTGT
mdm-MIR391 sly-miR4376 ACGCAGGAGAGATGACGCCGA KNOWN MDP0000230664no hits with E-value < 1e-10 3 21.053 1 - 21 263 - 283 Cleavage 
AGCCGCAGTAGAGAGGACGCA
 ::::: :::::::::::::
ACGGCGCCATCTCTCCTGCGA
mdm-MIR391 sly-miR4376 ACGCAGGAGAGATGACGCCGA KNOWN MDP0000375136no hits with E-value < 1e-10 3 19.974 1 - 21 267 - 287 Cleavage 
AGCCGCAGTAGAGAGGACGCA
 : :::::::::::::::::
ACAGCGTCATCTCTCCTGCGA
mdm-MIR391 sly-miR4376 ACGCAGGAGAGATGACGCCGA KNOWN MDP0000250895DUF246 domain-containing protein At1g04910
E-value: 9e-67
more		 3 20.578 1 - 21 1027 - 1047 Cleavage 
AGCCGCAGTAGAGAGGACGCA
:::::: : :.:::.::::::
TCGGCGGCTTTTCTTCTGCGT

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KNOWN and CONSERVED: 0 (0)
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NOVEL: 0 (0)