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Malus Domestica - miRNA targets Filter by mature miRNA sequence or return to all        Help


name

mature homolog

mature

mature status

target

best UniProt hit

expectation

UPE

miRNA start-end

target start-end

inhibition

miRNA:target duplex
mdm-MIR1511 mdm-miR1511 ACCTAGCTCTGATACCATGAA KNOWN TC65106no hits with E-value < 1e-10 2.5 22.294 1 - 20 96 - 116 Cleavage 
AGTACCATAGTCTCGANTCCA
:::::::::::::::: ::::
TCATGGTATCAGAGCTTAGGT
mdm-MIR1511 mdm-miR1511 ACCTAGCTCTGATACCATGAA KNOWN TC69999no hits with E-value < 1e-10 3 16.387 1 - 21 114 - 134 Translation 
AAGTACCATAGTCTCGATCCA
::: :::::::  ::::::::
TTCTTGGTATCCAAGCTAGGT
mdm-MIR1511 mdm-miR1511 ACCTAGCTCTGATACCATGAA KNOWN MDP0000174806no hits with E-value < 1e-10 3 21.525 1 - 21 48 - 68 Cleavage 
AAGTACCATAGTCTCGATCCA
 :::::::::.::::: ::::
ATCATGGTATTAGAGCAAGGT
mdm-MIR1511 mdm-miR1511 ACCTAGCTCTGATACCATGAA KNOWN MDP0000251567no hits with E-value < 1e-10 2.5 22.206 1 - 21 1276 - 1295 Cleavage 
AAGTACCATAGTCTCGATCCA
::::::::::::::: :::::
TTCATGGTATCAGAGNTAGGT
mdm-MIR1511 mdm-miR1511 ACCTAGCTCTGATACCATGAA KNOWN MDP0000196661no hits with E-value < 1e-10 3 20.761 1 - 21 663 - 682 Cleavage 
AAGTACCATAGTCTCGATCCA
::.::::::::::::: ::::
TTTATGGTATCAGAGCNAGGT
mdm-MIR1511 mdm-miR1511 ACCTAGCTCTGATACCATGAA KNOWN MDP0000863009no hits with E-value < 1e-10 3 21.648 1 - 21 663 - 682 Cleavage 
AAGTACCATAGTCTCGATCCA
::.::::::::::::: ::::
TTTATGGTATCAGAGCNAGGT

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KNOWN: 1 (6)
KNOWN and CONSERVED: 0 (0)
CONSERVED: 0 (0)
NOVEL: 0 (0)