Malus Domestica - miRNA targets

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Malus Domestica - miRNA targets Filter by mature miRNA sequence or return to all Help

name	mature homolog	mature	mature status	target	best UniProt hit	expectation	UPE	miRNA start-end	target start-end	inhibition	miRNA:target duplex
mdm-MIR195N	None	ACACAATATACGATGAACAGA	NOVEL	TC89595	no hits with E-value < 1e-10	2.5	15.846	1 - 21	645 - 665	Cleavage	AGACAAGTAGCATATAACACA :::::::::.::: :::::: TCTGTTCATTGTACATTGTGC
mdm-MIR195N	None	ACACAATATACGATGAACAGA	NOVEL	EB139057	no hits with E-value < 1e-10	3	19.116	1 - 21	259 - 279	Cleavage	AGACAAGTAGCATATAACACA :.::::: :::::::: :::: TTTGTTCTTCGTATATAGTGT
mdm-MIR195N	None	ACACAATATACGATGAACAGA	NOVEL	EB139745	no hits with E-value < 1e-10	3	19.116	1 - 21	249 - 269	Cleavage	AGACAAGTAGCATATAACACA :.::::: :::::::: :::: TTTGTTCTTCGTATATAGTGT
mdm-MIR195N	None	ACACAATATACGATGAACAGA	NOVEL	TC61299	no hits with E-value < 1e-10	3	20.714	1 - 21	324 - 344	Translation	AGACAAGTAGCATATAACACA :: ::::::: ::::::::: TCCGTTCATCATATATTGTGC
mdm-MIR195N	None	ACACAATATACGATGAACAGA	NOVEL	MDP0000540157	no hits with E-value < 1e-10	1.5	16.827	1 - 21	2790 - 2810	Cleavage	AGACAAGTAGCATATAACACA :::::::::::::::: :::: TCTGTTCATCGTATATCGTGT
mdm-MIR195N	None	ACACAATATACGATGAACAGA	NOVEL	MDP0000252183	no hits with E-value < 1e-10	2	13.414	1 - 21	197 - 217	Cleavage	AGACAAGTAGCATATAACACA :: ::::::::::::::::: TCCGTTCATCGTATATTGTGC
mdm-MIR195N	None	ACACAATATACGATGAACAGA	NOVEL	MDP0000292227	no hits with E-value < 1e-10	2	24.529	1 - 21	1189 - 1209	Cleavage	AGACAAGTAGCATATAACACA :: ::::::::::::::::: TCCGTTCATCGTATATTGTGC
mdm-MIR195N	None	ACACAATATACGATGAACAGA	NOVEL	MDP0000701080	no hits with E-value < 1e-10	2.5	10.445	1 - 21	121 - 141	Cleavage	AGACAAGTAGCATATAACACA :::: :.:::::.::: :::: TCTGCTTATCGTGTATNGTGT
mdm-MIR195N	None	ACACAATATACGATGAACAGA	NOVEL	MDP0000307465	no hits with E-value < 1e-10	3	24.131	1 - 21	66 - 86	Translation	AGACAAGTAGCATATAACACA :.::::.::: ::::::::: TTTGTTTATCATATATTGTGC
mdm-MIR195N	None	ACACAATATACGATGAACAGA	NOVEL	MDP0000287992	Protein LHY E-value: 1e-39 more	3	8.626	1 - 21	440 - 460	Cleavage	AGACAAGTAGCATATAACACA : : ::::. :::::::::: TNCGNTCATTNTATATTGTGT
mdm-MIR195N	None	ACACAATATACGATGAACAGA	NOVEL	MDP0000257558	no hits with E-value < 1e-10	3	13.686	1 - 21	3162 - 3182	Cleavage	AGACAAGTAGCATATAACACA :::::::::.::: :: :::: TCTGTTCATTGTACATCGTGT
mdm-MIR195N	None	ACACAATATACGATGAACAGA	NOVEL	MDP0000159795	no hits with E-value < 1e-10	3	18.245	1 - 21	84 - 104	Cleavage	AGACAAGTAGCATATAACACA :. ::::::::::::: :::: TTAGTTCATCGTATATCGTGT
mdm-MIR195N	None	ACACAATATACGATGAACAGA	NOVEL	MDP0000233800	no hits with E-value < 1e-10	3	24.461	1 - 21	216 - 236	Cleavage	AGACAAGTAGCATATAACACA :. :::::::::::::: ::: TTCGTTCATCGTATATTATGT

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KNOWN: 0 (0)
KNOWN and CONSERVED: 0 (0)
CONSERVED: 0 (0)
NOVEL: 1 (13)