Malus Domestica - miRNA targets

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Malus Domestica - miRNA targets Filter by mature miRNA sequence or return to all Help

name	mature homolog	mature	mature status	target	best UniProt hit	expectation	UPE	miRNA start-end	target start-end	inhibition	miRNA:target duplex
mdm-MIR227N	None	AAGTTCATTCAAACACCATGT	NOVEL	TC92534	no hits with E-value < 1e-10	1	14.899	1 - 21	598 - 618	Cleavage	TGTACCACAAACTTACTTGAA ::::::::::::.::::.::: ACATGGTGTTTGGATGAGCTT
mdm-MIR227N	None	AAGTTCATTCAAACACCATGT	NOVEL	CO723106	no hits with E-value < 1e-10	1.5	14.503	1 - 21	393 - 413	Cleavage	TGTACCACAAACTTACTTGAA ::::::::::::.::::::: ACATGGTGTTTGGATGAACTC
mdm-MIR227N	None	AAGTTCATTCAAACACCATGT	NOVEL	GO536033	no hits with E-value < 1e-10	2	18.538	1 - 21	486 - 506	Cleavage	TGTACCACAAACTTACTTGAA ::::::::::::.::::: :: ACATGGTGTTTGGATGAAATT
mdm-MIR227N	None	AAGTTCATTCAAACACCATGT	NOVEL	TC92216	no hits with E-value < 1e-10	2	14.361	1 - 21	225 - 245	Cleavage	TGTACCACAAACTTACTTGAA ::::::::::::.:: ::::: ACATGGTGTTTGGATAAACTT
mdm-MIR227N	None	AAGTTCATTCAAACACCATGT	NOVEL	TC68914	no hits with E-value < 1e-10	2	18.195	1 - 21	375 - 395	Cleavage	TGTACCACAAACTTACTTGAA :: :::::::::.::::.::: ACTTGGTGTTTGGATGAGCTT
mdm-MIR227N	None	AAGTTCATTCAAACACCATGT	NOVEL	EB150891	no hits with E-value < 1e-10	2	17.511	1 - 21	292 - 312	Cleavage	TGTACCACAAACTTACTTGAA :::::::: :::.::::.::: ACATGGTGCTTGGATGAGCTT
mdm-MIR227N	None	AAGTTCATTCAAACACCATGT	NOVEL	TC75498	no hits with E-value < 1e-10	2	13.056	1 - 21	596 - 616	Translation	TGTACCACAAACTTACTTGAA :.:::::::: :.:::::::: ATATGGTGTTCGGATGAACTT
mdm-MIR227N	None	AAGTTCATTCAAACACCATGT	NOVEL	EB151465	no hits with E-value < 1e-10	2	11.95	1 - 21	619 - 639	Cleavage	TGTACCACAAACTTACTTGAA : :::::: :::::::::::: AAATGGTGCTTGAATGAACTT
mdm-MIR227N	None	AAGTTCATTCAAACACCATGT	NOVEL	TC72443	no hits with E-value < 1e-10	2	12.659	1 - 21	539 - 559	Cleavage	TGTACCACAAACTTACTTGAA : :::::: :::::::::::: AAATGGTGCTTGAATGAACTT
mdm-MIR227N	None	AAGTTCATTCAAACACCATGT	NOVEL	TC75166	no hits with E-value < 1e-10	2.5	14.256	1 - 21	706 - 726	Cleavage	TGTACCACAAACTTACTTGAA :::::::: ::::: :::::: ACATGGTGCTTGAAGGAACTT
mdm-MIR227N	None	AAGTTCATTCAAACACCATGT	NOVEL	EB156829	no hits with E-value < 1e-10	2.5	15.792	1 - 21	325 - 345	Cleavage	TGTACCACAAACTTACTTGAA :: ::::: :::.:::::::: ACCTGGTGCTTGGATGAACTT
mdm-MIR227N	None	AAGTTCATTCAAACACCATGT	NOVEL	GO515820	no hits with E-value < 1e-10	3	17.136	1 - 21	506 - 526	Cleavage	TGTACCACAAACTTACTTGAA ::.::::: ::::: :::::: ACGTGGTGCTTGAAAGAACTT
mdm-MIR227N	None	AAGTTCATTCAAACACCATGT	NOVEL	TC81048	no hits with E-value < 1e-10	3	17.075	1 - 21	279 - 299	Cleavage	TGTACCACAAACTTACTTGAA : .::::::::::: :::::: AGGTGGTGTTTGAACGAACTT
mdm-MIR227N	None	AAGTTCATTCAAACACCATGT	NOVEL	TC94331	no hits with E-value < 1e-10	2.5	13.567	1 - 21	495 - 515	Cleavage	TGTACCACAAACTTACTTGAA : :::::: :::.:::::::: AAATGGTGCTTGGATGAACTT
mdm-MIR227N	None	AAGTTCATTCAAACACCATGT	NOVEL	TC64702	no hits with E-value < 1e-10	3	17.034	1 - 21	263 - 283	Cleavage	TGTACCACAAACTTACTTGAA : :::::: :::.::::.::: AAATGGTGCTTGGATGAGCTT
mdm-MIR227N	None	AAGTTCATTCAAACACCATGT	NOVEL	TC74750	no hits with E-value < 1e-10	3	15.924	1 - 21	459 - 479	Cleavage	TGTACCACAAACTTACTTGAA :: ::::: :::.::::.::: ACTTGGTGCTTGGATGAGCTT
mdm-MIR227N	None	AAGTTCATTCAAACACCATGT	NOVEL	MDP0000527034	TMV resistance protein N E-value: 8e-35 more	0.5	15.656	1 - 21	703 - 723	Cleavage	TGTACCACAAACTTACTTGAA ::::::::::::.:::::::: ACATGGTGTTTGGATGAACTT
mdm-MIR227N	None	AAGTTCATTCAAACACCATGT	NOVEL	MDP0000403562	Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 E-value: 2e-138 more	0.5	12.954	1 - 21	637 - 657	Cleavage	TGTACCACAAACTTACTTGAA ::::::::::::.:::::::: ACATGGTGTTTGGATGAACTT
mdm-MIR227N	None	AAGTTCATTCAAACACCATGT	NOVEL	MDP0000449255	TMV resistance protein N E-value: 5e-36 more	1	17.603	1 - 21	634 - 654	Cleavage	TGTACCACAAACTTACTTGAA ::::::::::::.::::.::: ACATGGTGTTTGGATGAGCTT
mdm-MIR227N	None	AAGTTCATTCAAACACCATGT	NOVEL	MDP0000328856	no hits with E-value < 1e-10	1	17.617	1 - 21	717 - 737	Cleavage	TGTACCACAAACTTACTTGAA ::::::::::::.::::.::: ACATGGTGTTTGGATGAGCTT
mdm-MIR227N	None	AAGTTCATTCAAACACCATGT	NOVEL	MDP0000864830	TMV resistance protein N E-value: 2e-36 more	1	14.955	1 - 21	643 - 663	Cleavage	TGTACCACAAACTTACTTGAA ::::::::::::.::::.::: ACATGGTGTTTGGATGAGCTT
mdm-MIR227N	None	AAGTTCATTCAAACACCATGT	NOVEL	MDP0000710999	TMV resistance protein N E-value: 2e-102 more	1	16.492	1 - 21	577 - 597	Cleavage	TGTACCACAAACTTACTTGAA ::::::::::::.::::.::: ACATGGTGTTTGGATGAGCTT
mdm-MIR227N	None	AAGTTCATTCAAACACCATGT	NOVEL	MDP0000685425	TMV resistance protein N E-value: 1e-106 more	1	16.281	1 - 21	964 - 984	Cleavage	TGTACCACAAACTTACTTGAA ::::::::::::.::::.::: ACATGGTGTTTGGATGAGCTT
mdm-MIR227N	None	AAGTTCATTCAAACACCATGT	NOVEL	MDP0000470223	TMV resistance protein N E-value: 1e-135 more	1	19.41	1 - 21	682 - 702	Cleavage	TGTACCACAAACTTACTTGAA ::::::::::::.::::.::: ACATGGTGTTTGGATGAGCTT
mdm-MIR227N	None	AAGTTCATTCAAACACCATGT	NOVEL	MDP0000437040	TMV resistance protein N E-value: 1e-141 more	1	18.649	1 - 21	703 - 723	Cleavage	TGTACCACAAACTTACTTGAA ::::::::::::.::::.::: ACATGGTGTTTGGATGAGCTT
mdm-MIR227N	None	AAGTTCATTCAAACACCATGT	NOVEL	MDP0000749757	TMV resistance protein N E-value: 5e-123 more	1	17.29	1 - 21	562 - 582	Cleavage	TGTACCACAAACTTACTTGAA ::::::::::::.::::.::: ACATGGTGTTTGGATGAGCTT
mdm-MIR227N	None	AAGTTCATTCAAACACCATGT	NOVEL	MDP0000457940	Calcium-dependent protein kinase 5 E-value: 0.0 more	1	17.479	1 - 21	697 - 717	Cleavage	TGTACCACAAACTTACTTGAA ::::::::::::.::::.::: ACATGGTGTTTGGATGAGCTT
mdm-MIR227N	None	AAGTTCATTCAAACACCATGT	NOVEL	MDP0000465174	Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 E-value: 6e-145 more	1	19.141	1 - 21	556 - 576	Cleavage	TGTACCACAAACTTACTTGAA ::::::::::::.::::.::: ACATGGTGTTTGGATGAGCTT
mdm-MIR227N	None	AAGTTCATTCAAACACCATGT	NOVEL	MDP0000701213	no hits with E-value < 1e-10	1.5	10.37	1 - 21	247 - 267	Cleavage	TGTACCACAAACTTACTTGAA :::::::::::::: :::::: ACATGGTGTTTGAAGGAACTT
mdm-MIR227N	None	AAGTTCATTCAAACACCATGT	NOVEL	MDP0000675339	no hits with E-value < 1e-10	1.5	18.415	1 - 21	252 - 272	Cleavage	TGTACCACAAACTTACTTGAA ::.:::::::::.::::.::: ACGTGGTGTTTGGATGAGCTT
mdm-MIR227N	None	AAGTTCATTCAAACACCATGT	NOVEL	MDP0000561399	TMV resistance protein N E-value: 1e-35 more	2	19.803	1 - 21	634 - 654	Cleavage	TGTACCACAAACTTACTTGAA ::::::::::::.::::.:: ACATGGTGTTTGGATGAGCTC
mdm-MIR227N	None	AAGTTCATTCAAACACCATGT	NOVEL	MDP0000156744	TMV resistance protein N E-value: 7e-43 more	2	16.197	1 - 21	1543 - 1563	Cleavage	TGTACCACAAACTTACTTGAA :.::::::::::::::.::: TCGTGGTGTTTGAATGAGCTT
mdm-MIR227N	None	AAGTTCATTCAAACACCATGT	NOVEL	MDP0000612864	TMV resistance protein N E-value: 2e-118 more	2	17.342	1 - 21	604 - 624	Cleavage	TGTACCACAAACTTACTTGAA ::.:::::::::.::::::: ACGTGGTGTTTGGATGAACTC
mdm-MIR227N	None	AAGTTCATTCAAACACCATGT	NOVEL	MDP0000123760	TMV resistance protein N E-value: 2e-109 more	2	16.197	1 - 21	568 - 588	Cleavage	TGTACCACAAACTTACTTGAA :.::::::::::::::.::: TCGTGGTGTTTGAATGAGCTT
mdm-MIR227N	None	AAGTTCATTCAAACACCATGT	NOVEL	MDP0000455346	TMV resistance protein N E-value: 2e-146 more	2	15.846	1 - 21	556 - 576	Cleavage	TGTACCACAAACTTACTTGAA ::::::::::::..:::::: ACATGGTGTTTGGGTGAACTC
mdm-MIR227N	None	AAGTTCATTCAAACACCATGT	NOVEL	MDP0000183137	TMV resistance protein N E-value: 7e-119 more	2	18.23	1 - 21	580 - 600	Cleavage	TGTACCACAAACTTACTTGAA :.::::::::::::::.::: TCGTGGTGTTTGAATGAGCTT
mdm-MIR227N	None	AAGTTCATTCAAACACCATGT	NOVEL	MDP0000445391	TMV resistance protein N E-value: 1e-20 more	1.5	15.938	1 - 21	589 - 609	Cleavage	TGTACCACAAACTTACTTGAA :::::::: ::::::::.::: ACATGGTGCTTGAATGAGCTT
mdm-MIR227N	None	AAGTTCATTCAAACACCATGT	NOVEL	MDP0000771204	TMV resistance protein N E-value: 3e-38 more	2	14.112	1 - 21	334 - 354	Cleavage	TGTACCACAAACTTACTTGAA ::.::::::::::: :::::: ACGTGGTGTTTGAAGGAACTT
mdm-MIR227N	None	AAGTTCATTCAAACACCATGT	NOVEL	MDP0000740503	TMV resistance protein N E-value: 1e-34 more	1.5	9.721	1 - 21	346 - 366	Cleavage	TGTACCACAAACTTACTTGAA ::::::::: ::.:::::::: ACATGGTGTCTGGATGAACTT
mdm-MIR227N	None	AAGTTCATTCAAACACCATGT	NOVEL	MDP0000710944	TMV resistance protein N E-value: 5e-35 more	1.5	18.554	1 - 21	460 - 480	Cleavage	TGTACCACAAACTTACTTGAA :::::::: ::::::::.::: ACATGGTGCTTGAATGAGCTT
mdm-MIR227N	None	AAGTTCATTCAAACACCATGT	NOVEL	MDP0000280108	no hits with E-value < 1e-10	1.5	13.403	1 - 21	244 - 264	Cleavage	TGTACCACAAACTTACTTGAA :::::::: ::::::::.::: ACATGGTGCTTGAATGAGCTT

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KNOWN: 0 (0)
KNOWN and CONSERVED: 0 (0)
CONSERVED: 0 (0)
NOVEL: 1 (41)

name

mature homolog

mature

mature status

target

best UniProt hit

expectation

UPE

miRNA start-end

target start-end

inhibition

miRNA:target duplex