HOME miRNA TABLE miRNA DEEP-SEQ IN SILICO TARGETS DEGRADOME TARGETS GOrilla INTRONS DOWNLOADS CONTACT




Malus x domestica: degradome data Filter by mature miRNA sequence or return all


name

sequence

fragment abundance

weighted fragment abundance

p-value

cleavage position

alignment score

plot

alignment

transcript name

duplex

BLAST search

most similar mature

mdm-MIR396b TTCCACAGCTTTCTTGAACTG 91 45.5 0 433 2.5 plot alignment gnl|UG|Mdo#S56529540
 5'    TTCCAC-AGCTTTCTTGAACTG        3'
       |||||| ||||||||||||| o
 3' ACTAAGGTGTTCGAAAGAACTTGCTATTGCCG 5'
UniProt: no hits
miRBase: no hits
TTCCACAGCTTTCTTGAACTGT
(0 mismatches)

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