HOME miRNA TABLE miRNA DEEP-SEQ IN SILICO TARGETS DEGRADOME TARGETS GOrilla INTRONS DOWNLOADS CONTACT




Malus x domestica: degradome data Filter by mature miRNA sequence or return all


name

sequence

fragment abundance

weighted fragment abundance

p-value

cleavage position

alignment score

plot

alignment

transcript name

duplex

BLAST search

most similar mature

mdm-MIR398a TGTGTTCTCAGGTCACCCCTT 8 8 0.01 141 2.5 plot alignment gnl|UG|Mdo#S35708882
 5'     TGTGTTCTCAGGTCACCCCTT        3'
        o||| ||||||| ||||||||
 3' AGCTGCACTAGAGTCCTGTGGGGAAACTCTCG 5'
UniProt best hit: sp|Q07796|SODC_IPOBA (E-value = 3e-95)
miRBase: no hits
TGTGTTCTCAGGTCACCCCTT
(0 mismatches)

Entries Per Page
Displaying Page of