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Malus x domestica: degradome data Filter by mature miRNA sequence or return all


name

sequence

fragment abundance

weighted fragment abundance

p-value

cleavage position

alignment score

plot

alignment

transcript name

duplex

BLAST search

most similar mature

mdm-MIR535a TGACAACGAGAGAGAGCACGC 8 8 0.01 803 3 plot alignment MDP0000297978
 5'    TGACA-ACGAGAGAGAGCACGC        3'
       ||||| | |||||||||||||
 3' TAAACTGTCTTCTCTCTCTCGTGCCGAACTCA 5'
UniProt best hit: sp|Q700W2|SPL9_ARATH (E-value = 3e-74)
miRBase: no hits
TGACAACGAGAGAGAGCACGC
(0 mismatches)

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