HOME miRNA TABLE miRNA DEEP-SEQ IN SILICO TARGETS DEGRADOME TARGETS GOrilla INTRONS DOWNLOADS CONTACT




Malus x domestica: degradome data Filter by mature miRNA sequence or return all


name

sequence

fragment abundance

weighted fragment abundance

p-value

cleavage position

alignment score

plot

alignment

transcript name

duplex

BLAST search

most similar mature

mdm-MIR160e GCGTATGAGGAGCCATGCATA 5 2.5 0.03 1750 3.5 plot alignment MDP0000181200
 5'     GCGTATGAGGAGCCATGCATA        3'
         ||||||||||o |||||||
 3' CGAAGGCATACTCCTTCGTACGTACGTTGTGT 5'
UniProt: no hits
miRBase: no hits
GCGTATGAGGAGCCATGCATA
(0 mismatches)

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