HOME miRNA TABLE miRNA DEEP-SEQ IN SILICO TARGETS DEGRADOME TARGETS GOrilla INTRONS DOWNLOADS CONTACT




Malus x domestica: degradome data Filter by mature miRNA sequence or return all


name

sequence

fragment abundance

weighted fragment abundance

p-value

cleavage position

alignment score

plot

alignment

transcript name

duplex

BLAST search

most similar mature

mdm-MIR210N CAATGGGGAGGAGTCATTCGTA 11 1.83333 0.02 1416 3.5 plot alignment MDP0000141403
 5'     CAATGGGGAGGAGTCATTCGTA       3'
        ||||||o|||o||| |o| |||
 3' TTAAGTTACCTCTCTTCATTGATCATCCTAGT 5'
UniProt best hit: sp|Q9C8N5|STOP1_ARATH (E-value = 0.0)
miRBase: no hits
None

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