HOME miRNA TABLE miRNA DEEP-SEQ IN SILICO TARGETS DEGRADOME TARGETS GOrilla INTRONS DOWNLOADS CONTACT




Malus x domestica: degradome data Filter by mature miRNA sequence or return all


name

sequence

fragment abundance

weighted fragment abundance

p-value

cleavage position

alignment score

plot

alignment

transcript name

duplex

BLAST search

most similar mature

mdm-MIR131N CAAGCTTCCTCTTCATACTCGT 27 27 0.03 412 4 plot alignment gnl|UG|Mdo#S26340242
 5'     CAAGCTTCCTCTTCATACTCGT       3'
        |||| ||||||o||||| | |o
 3' AAGTGTTCCAAGGAGGAGTAT-ACCGTAATGT 5'
UniProt best hit: sp|O81312|GAE3_ARATH (E-value = 1e-48)
miRBase: no hits
None

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